Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00703 ATGACTCAAACTTCACCTTTCAAAGTTGTTCAAGTTTGCAGTGTGGCACCGCTACAAGGAACTCCAACCTCTCTTCCCCTCACCTTCTTTGATCTCTTATGGCTAAGATTTCCACCTGTTGAGCGTCTCTTCTTCTATGAATACCAAGACTCAACATCTTCTTTCTTTGACTCTGTTCTTCCCAATCTCAAACACTCCCTTTCACTCACTCTCCAACACTTCCTCCCTCTTGCTGGCAACTTCACTTGGCCCCATGACTCTTCCAAACCCATCATCCAATATGTCCCTGGTGATGCTGTCTCCTTCACCGTTGCTGAGTCCAACGCCACCTTCACCCATCTCTGTTCTGATCTCTGTGAAGCTGCACAACGATATCCCTTGATACCCCACTTGACCACTTCCCACGAACAAGCTTCTGTGATAGCACTTCAAGTCACTCTGTTTCCAAACTCTGGCTTTTGCATAGGAATAACCACACACCATGCGGCTTTTGATGGAAAGTCTTCAACTTCCTTTATGAAATCATGGGCCTATGCATGCTCTAAGTTTGGAGAATCGCCGTCTTTATCATCATTACCTGAAAATCTAACACCTTTCTTTGACAGATCAGTGATCAAAGACCCTGCAGGGATCGGTGAAGTGTACTCAGAGGCATGGTTGAAGCATGGTGGACCAAATAATCGAAGTCTCAAGGTGTGGGACTCCCTTAATGCAATACAGACCGATGCAATGAAAGGTTTGTTTGAATTAACACCCTCACATATCCAAAAGCTTAAGCAATATGCACACTCTGTGCTGAAAAAGAAGGATCACATATCAACATTTTCAGTGACATGTGCTTATGTATTGGCATGCTTAGTCAAAGCACAACAACCAAATTGCAATAGGTTTGTTTTCGTATTTAGTGTGGACTGCAGATCCCGCTTGGACCCTCCAATTCAGCCCACATATTTCGGAAATTGCATTGCAGGCCAAAAGATTGTGGTTGAGACAAAGAAGTTACTAGAAAAAGATGGATTCATTAGTGCTTTGGAAGGGATAATTGAAGCTTTGAATAGGGTGAAAGATGGAGTGCTAAATGGAATTGAAACTTTGATTTCAGCTATTTTAAATGTTCCGGAAGACAAAATATACTCTACTGCTGGATCCCCAAGGTTTGAGGTTTATAGTGTAGATTTTGGATGGGGAAGGCCTAAAAAGGTGGATGTCACTTCCATAGATAAAACAGGGGCATTTTCCCTTTCGGATAGTAGGAAAAATGATGGTGGAATTGAGATTGGGTTGGCGTTGAAAAAACCAGAAATGGAAGCTTTTTCTGCCCTTTTTGTTGAAGGACTTGAATCCTTTTAA 1350 0.4244 MTQTSPFKVVQVCSVAPLQGTPTSLPLTFFDLLWLRFPPVERLFFYEYQDSTSSFFDSVLPNLKHSLSLTLQHFLPLAGNFTWPHDSSKPIIQYVPGDAVSFTVAESNATFTHLCSDLCEAAQRYPLIPHLTTSHEQASVIALQVTLFPNSGFCIGITTHHAAFDGKSSTSFMKSWAYACSKFGESPSLSSLPENLTPFFDRSVIKDPAGIGEVYSEAWLKHGGPNNRSLKVWDSLNAIQTDAMKGLFELTPSHIQKLKQYAHSVLKKKDHISTFSVTCAYVLACLVKAQQPNCNRFVFVFSVDCRSRLDPPIQPTYFGNCIAGQKIVVETKKLLEKDGFISALEGIIEALNRVKDGVLNGIETLISAILNVPEDKIYSTAGSPRFEVYSVDFGWGRPKKVDVTSIDKTGAFSLSDSRKNDGGIEIGLALKKPEMEAFSALFVEGLESF. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00703 449 SUPERFAMILY CoA-dependent acyltransferases 247 448 - -
Seca9g00703 449 Gene3D - 7 229 IPR023213 -
Seca9g00703 449 PANTHER - 8 449 - -
Seca9g00703 449 Gene3D - 240 449 IPR023213 -
Seca9g00703 449 Pfam Transferase family 23 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00703 Seca-Chr9 13925575 13926924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00703 15 444 Monolignol Biosynthesis Gene Families AT5G48930 26.770 8.63e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00703 - - gmx:100800849 592.038