Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00700 ATGTCATGCTTCACCACCAAATCCAACACCACAGACTCCTTTCGATTAGAACAACTCTGTCACCGCTTCTCTCTTTCCCAGCTCAAAGCAGCCACAAAAAGTTTCCATACATGGTTATCTATAGGTGGAGAAGGTCCATGTCATGTCTACAAAGGCCACCTCAAATCCATAGGAGACGTTGCCATCAAGCACTTCAAGACAAGAAGCTTAGCAGCAGAAATAGAATTCAGGGTTGAAGTCAAAATTCTCTGTCAACTACGCCACCCAAACATTATTCCTCTGATTGGTTTCTGTGAGCACAAAAACAAAAAGTTCACCGTGTATGATTATATCTCCAATGGTAGCCTCTATGATTGTTTGCATGGCACCAATGCTATTCCCATCTCATGGAAACAAAGGCTCCAAATCTGCATTGGCGTGGCTCGTGGACTGCACTACCTTCATTCTGGAACCAAGCTACCTATCCTTCACCGTGCTGTGAAATCAAAAAACATTCTTTTGGACAAGAATTTGGTGCCCAGAGTGGCAGATTTTGGACTCTGCAAGAAACAACCCCAAGGGGAGTCAACGCCAAAGCCACCAAGAATTGAGTTGAGGGAAAATTTTGAGGTTAGTATGGAATACATGGACCCTGAATTTTATCTTACTGGAAGGCTATCAGAGAGGTCTGATGTGTACTCTTTTGGTGTGGTTCTGTTGGAGGTTTTGTGTAGAAAGGAAGCTTATGTTTTGACCCCAGATGGAGGTGGTTATGAGTATCTTGCTAGATGGGCTTTTGAGGATGAAAGGAGGGGAGTTGTTGAGAAGATTGTTGATCCATCTCTTGTGGGGAAAATAGCACCAGAGTGTTGGGAAGTGTTCATTGAGATCGTTCAGAGATGCCTGGTTTCGCCGGGTATAGAGAGGCCAACTATGGGTGAAGTGGAGGTTGTCCTTGAGAATGCATTGCAATTGCAGGAAAGAGCAGATGCTGTGAAGGAAGGAGCATGA 990 0.4444 MSCFTTKSNTTDSFRLEQLCHRFSLSQLKAATKSFHTWLSIGGEGPCHVYKGHLKSIGDVAIKHFKTRSLAAEIEFRVEVKILCQLRHPNIIPLIGFCEHKNKKFTVYDYISNGSLYDCLHGTNAIPISWKQRLQICIGVARGLHYLHSGTKLPILHRAVKSKNILLDKNLVPRVADFGLCKKQPQGESTPKPPRIELRENFEVSMEYMDPEFYLTGRLSERSDVYSFGVVLLEVLCRKEAYVLTPDGGGYEYLARWAFEDERRGVVEKIVDPSLVGKIAPECWEVFIEIVQRCLVSPGIERPTMGEVEVVLENALQLQERADAVKEGA. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00700 329 Pfam Protein tyrosine and serine/threonine kinase 48 308 IPR001245 GO:0004672|GO:0006468
Seca9g00700 329 Gene3D Phosphorylase Kinase; domain 1 2 110 - -
Seca9g00700 329 ProSiteProfiles Protein kinase domain profile. 35 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00700 329 SUPERFAMILY Protein kinase-like (PK-like) 25 316 IPR011009 -
Seca9g00700 329 Gene3D Transferase(Phosphotransferase) domain 1 111 327 - -
Seca9g00700 329 PANTHER OS07G0166700 PROTEIN 20 319 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00700 Seca-Chr9 13876364 13877353 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00700 19 320 Receptor kinase-like Gene Family AT4G39110 45.875 1.04e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca9g00700 PK_Tyr_Ser-Thr 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00700 - - gmx:100800314 500.745