Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00698 ATGAGGTTCACCACTACAATCACCACCGCAGCAGCACTGATCCTCCTCTACTTTGCACTCTCCCTCCAAGCATACGACCCTGTGGATCGTTTCACCATCGACTGTGGCTCCAGCGGCAACTTCTCCGACGGGGAAAGAACATGGTCAGGGGACATAAACTCAAAGCTCTTATCTGCTCAAGACAACTCTGCAACTGTGTCTGGCACAGCAACCACACAACCTTCTTCTGTCAACAAAATCCCTTATTCCACAGCTCGCTTGTCTCACTCCCAATTCAACTACTCCTTCCCCGTCACCGCAGGTCCAAAATTCCTCCGCCTCTTCTTCTACCCTGCTTCATACCCTGGCGGCTTTGCCCGCAACAACGCCTCCTTCACCGTCATATCCAACGGATTCACGCTTCTCAAAGATTTCAACGCTTCACTCAACGCAGACGCTGAAGGCGTCCCCACTATCTTGAGAGAATACACCATCAACGTGGATGACGGACAAAGGCTTGACCTGAGCATGATTCCCAGCTCAAATTCTTATGCTTTCATCAACGGAATCGAGGTCTTATCCATGCCTAGTGATCTCTACTACACATCATCAAATAGCCCAGGGATCAAGCTTGTGGGTCCTGGTACCCAATTCAGTGTTGAAACCACTAGAGCACTACAGAAAAGTTATAGAATCAAAGTTGGAGGGCAAACAATCTCAGCCAAGAGTGACACGGGCTTGTTCAGAAGCTGGGATGGTAACGATCAAGACTATTTAAGAACACCAAGCGCAAGGGATGCTTTACCGGCTGTTTTCAGTGGTTTGAACATCACCGTGAACCCTGATTACGTGGCACCCAAGGACCTATACAGAACAGCGCGTGATATGGGCCGTCAAGGCGATATCAACAAAAGGGTGAACTTGACTTGGTCGTTCTCCGTTGATTCTGGGTTCTACTACATGCTCAGGCTCCACTTCTGCGAGTTTGAGGAAAACATCGCTGACATCAGCGACAGGGTGTTCTTCATTTTCATACAAGGCCAGGTGGCGGAGGATCGCGCGGATGTAATGAAATGGAGTGGCAAAAAAAAGGGTCTTGCCGTGCAGAAAGATTACGCTGTGTCCATTCCACAGAGTAATAACAAAAAGGTCAATCTCACGCTCGAAATGCGTCCTTACACAGATGCTAAAGATACACTATACAGCGACGCCTTCCTGAACGGGCTTGAAATATTCAAACTCAGCCAAGTTGGCTCTAGCAACCTAGCCGGACCCAACCCGGACCCGCTTCAGCTTCCATCAAACCCGCCAGTTCAAAGCAAAAGTAAGAGCAGCAGCGGAACGACAATAGGAATCGTCGCGGGCGTCGTATCCGGCGTCGTTTTGGTGTCACTTGTCGTTTTCTTCGTAGTCCTCAGCCGCCGTAAGAGAAGAGCGGAATGGAAAACCAAGGGTAAGGATTCAAAGTCTACCGCGACTTCCAAGTGGGGTCCACTGTCGTTTTCAACGACCAAGTCAAGCAACACGCAGAACTCATCCCTACCGTCCGATCTTTGCCGCCACTTCTCCCTCGCAGAGATCCGCGCCGCTACCAACAACTTCGACGAGCTCTTCATCGTCGGCGTTGGAGGATTCGGCCACGTGTACAAGGGCTACATCGACGGCGGTTCCATCCCTGTAGCCATAAAACGGCTCAAACCAGGTTCGCAGCAGGGTGCACACGAGTTCGTCACTGAGATCGACATGCTCTCGAAGCTTCGCCACCTCCACCTCGTTTCCCTCATTGGTTACTGTACCGAGAACAACGAGATGATCCTCATCTATGATTTCATGGGGCGTGGTACCCTCCGCGACCATCTCTACAACACCGATAACTCTCCATTGTCGTGGACGCAGCGCTTGCAGATTTGCATAGGCGCGGCGCGTGGGCTGCATTACCTCCATACAGGCGCGAAGCACACGATCATCCACCGTGATGTGAAAACCACGAATATCTTACTAGACGAAAAATGGGTGGCCAAGGTTTCGGATTTTGGGTTATCCAGAATTGGGCCCACGGGGATGTCCAAGGCCCATGTCAGCACTGTTGTGAAGGGAAGCATTGGGTATTTGGACCCAGAGTATTATAAACGACAGCGTTTGACAGAGAAGTCTGACGTGTACTCTTTCGGAGTGGTGTTGTTTGAGATACTGTGCGCTCGGCCGCCTCTGATCCGAACCGCGGAGAAGAAACAGGTGTCGCTGGCTGATTGGGCGAGGCATTGTTATCAAAGTGGGACCCTGAGCCAGATTGTGGACCCCACGCTGAAGGGGAAAATTGCGCCCGAGTGTTTGAGGAAGTTTGGGGAGATTGCGGTGAGTTGTTTATTGGACGATGGGACGCAGAGGCCGTCAATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGCTGCAAGAGAGTGCGGAGCAGAGGGAGCATGTTGTGAGCATGGGAGTGGTTGATGATGATGTTGTGGGAATAAGAAAGAAAGATGATAGTGATGATATGTTCAGTAGTGGTACCAGTGTGGGCCAGGTTTCTGATTTTAACAAGAGCAGTGTGATGAGCGTGACTACCAGTAGCGGAGACAATAGCATTAGCAGGGAAACTGATAGGCTGATGTCTGGATCCATTTTTTCGGAGATTATGGACCCAACGGCACGTTGA 2670 0.5079 MRFTTTITTAAALILLYFALSLQAYDPVDRFTIDCGSSGNFSDGERTWSGDINSKLLSAQDNSATVSGTATTQPSSVNKIPYSTARLSHSQFNYSFPVTAGPKFLRLFFYPASYPGGFARNNASFTVISNGFTLLKDFNASLNADAEGVPTILREYTINVDDGQRLDLSMIPSSNSYAFINGIEVLSMPSDLYYTSSNSPGIKLVGPGTQFSVETTRALQKSYRIKVGGQTISAKSDTGLFRSWDGNDQDYLRTPSARDALPAVFSGLNITVNPDYVAPKDLYRTARDMGRQGDINKRVNLTWSFSVDSGFYYMLRLHFCEFEENIADISDRVFFIFIQGQVAEDRADVMKWSGKKKGLAVQKDYAVSIPQSNNKKVNLTLEMRPYTDAKDTLYSDAFLNGLEIFKLSQVGSSNLAGPNPDPLQLPSNPPVQSKSKSSSGTTIGIVAGVVSGVVLVSLVVFFVVLSRRKRRAEWKTKGKDSKSTATSKWGPLSFSTTKSSNTQNSSLPSDLCRHFSLAEIRAATNNFDELFIVGVGGFGHVYKGYIDGGSIPVAIKRLKPGSQQGAHEFVTEIDMLSKLRHLHLVSLIGYCTENNEMILIYDFMGRGTLRDHLYNTDNSPLSWTQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPLIRTAEKKQVSLADWARHCYQSGTLSQIVDPTLKGKIAPECLRKFGEIAVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQREHVVSMGVVDDDVVGIRKKDDSDDMFSSGTSVGQVSDFNKSSVMSVTTSSGDNSISRETDRLMSGSIFSEIMDPTAR. 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00698 889 ProSiteProfiles Protein kinase domain profile. 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00698 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Seca9g00698 889 Gene3D Phosphorylase Kinase; domain 1 490 603 - -
Seca9g00698 889 MobiDBLite consensus disorder prediction 416 437 - -
Seca9g00698 889 FunFam FERONIA receptor-like kinase 30 189 - -
Seca9g00698 889 SMART serkin_6 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00698 889 SUPERFAMILY Protein kinase-like (PK-like) 499 802 IPR011009 -
Seca9g00698 889 ProSitePatterns Protein kinases ATP-binding region signature. 533 556 IPR017441 GO:0005524
Seca9g00698 889 Gene3D - 220 408 - -
Seca9g00698 889 Gene3D - 30 189 - -
Seca9g00698 889 PANTHER OS03G0124300 PROTEIN-RELATED 11 477 IPR046957 GO:0004672
Seca9g00698 889 Pfam Malectin-like domain 33 406 IPR024788 -
Seca9g00698 889 FunFam Receptor-like protein kinase FERONIA 499 603 - -
Seca9g00698 889 CDD STKc_IRAK 533 800 - -
Seca9g00698 889 Gene3D Transferase(Phosphotransferase) domain 1 604 825 - -
Seca9g00698 889 FunFam FERONIA receptor-like kinase 217 408 - -
Seca9g00698 889 Pfam Protein tyrosine and serine/threonine kinase 533 797 IPR001245 GO:0004672|GO:0006468
Seca9g00698 889 FunFam Receptor-like protein kinase FERONIA 604 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00698 Seca-Chr9 13869725 13872394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00698 20 889 Receptor kinase-like Gene Family AT3G51550 50.442 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca9g00698 Malectin_like 9e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00698 - - psat:127121083 1171.76