Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00683 ATGTCTAAAAAGGTTTTGAAATCCATGAAGGATGAAAATTCAGATTTGCAGAAGCAGATGGGGTGCATCAGTGGATTTTTTCAGCTGTTTGACCGCCACCGGTTCCTCACAGGCCAACGCAGTAGCAGCCACACTCGAGGTGGAACCAGTAATCACATCAAAGAGCTGAATAATACAACACAAAAGGCAACGGCAAGGAATGTGAAGGTTGCAAGAGAGAATCAACAATTCTCTACAGAATCATCAGGAACTTCAATGTCATCATCATCTTGTTCATCTAGCATGTCATCACTCGACTTTAACAGAACAATTCAGATAGAACCACCATCAATCATTCAAATCAAAATCCCAGAAAACTCCAATTCAGGCGCAGCAATGAAGCAACCTAGCAAACCAAGACATGAGTCCCTTGATTTCTATGATATTGTCAAAGAATCAATGCATAGAGATGCCCATTCCCAAGGATTGTCAGTAAAAACTGTGGCTAAAGAGGAAAAGAAGGGTCGTATCTTGAAACACATTGACTCTCCCCGGCCTTTGCAGGCCCCCAAATCTGTCAATACAGGAGTTATGGTTGCTTGGGATTCACCACGACTCTCCTATGATGGGAGGGATATACAAGATACATTCAAATCTGCTACAAAGCACAAGGAACTGCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGTTTCAAGGAAGGAACAAAATCTCGCAACCTTTTGAAGGGTCCAGAGAAAGGGTATGGGGGCTCCAGCACAATGCTTAAGCAGTTGCAAGAACCAGAAACTTCTAAAAGACCATCCAGTGTTGTAGCAAAGTTAATGGGACTGGAATCCTTCCCAGAATCAACCCAAACTTGTGATACTCCACAGGGGATCTCTGGCTGCACTACCAACAAAAATGAGACCTTTGCAGGATCTAGGATAAGTGATGAATACAAGCAACACCAAAGTTCAGTATCCCCAAGGACAACCAAGGGGTCTACCTTGCTTCAGTCTAGGAGGGATGCTTCAATCACAAATGTGACACCACATTCACGATTTTCGCTGGAACCAACTCCATGGAGGCAAACTGATACAAGCCAAGGTTCACAATTACAGGCTTCCCAGAGAAATGAATCTTCAACAAGAGCATCAAACCCATCCCTCTCTGTATATGGGGAAATTGAGAAAAGGATGGCAGATCTAGAGTTCAAAAAATCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTAGAAGCTATGCAGAGATATAAAGAATCATTGGCTTCCAATTCTCCATCTGACAGTACTCTCAGTGAAAGCTCGAAAGTACAAAGCCCAAGAATACGACAGAAGGACCCAACATCTGCCACTGTTGAGATGTCAAATTCAACCCAGGGTAATAAATCACCAATTGTCATCATGAAACCAGCAAAAGTTGCAAGAAAAACCAACAATTCTGCTTCCACAGAAATGTCAATTCATGGTAAATCAGGCCCCAATAAGTTTTGTCCTGGTAGTCCCACAAATAGAATATTGGTTGACAAGCTTGACAGGCAAACAGCAAAAGATAGTCCAACAATGAGACATGTCAAGGATCCTATTAGTCAACCCTTTCATTCAGTGGATAAGAGCAATAAGATGAGAACTTCAAAACGGATGCAGTCCTCAAAAGTTCCTCAAGTCATCAATGGAGAAAATAGCACCAACTCCAGCAATATAGCAGAGACAAGGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCACCAAGAAGTCCATCATCAGATTCCAGCAGTAACAGAAGACAACACAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACAACACCCAGACAAAAATTCTCTACTTTGCAGGATAGGAATGAACGTTTCAGTGAGATCAGCTATCAAAGGATGAATTTTAAGAATGAAGTTGATGTTATTTTGCCAGATTTTGACAGCATGAGAAGCATTGACTCTCACAGTGATATAGAAGCCATTCACATTGATCATTCTGAAAAGATCAATAGCAACTCCATCCAGCTAAAAGGCCAGAATCAAACTGTAAGTATTTATTCCTCCAATAATTGGATTTTTGCATCCAAATCACCTGGTTTAACATTCTTTCATTGA 2139 0.417 MSKKVLKSMKDENSDLQKQMGCISGFFQLFDRHRFLTGQRSSSHTRGGTSNHIKELNNTTQKATARNVKVARENQQFSTESSGTSMSSSSCSSSMSSLDFNRTIQIEPPSIIQIKIPENSNSGAAMKQPSKPRHESLDFYDIVKESMHRDAHSQGLSVKTVAKEEKKGRILKHIDSPRPLQAPKSVNTGVMVAWDSPRLSYDGRDIQDTFKSATKHKELPRLSLDSREGSIKSFKEGTKSRNLLKGPEKGYGGSSTMLKQLQEPETSKRPSSVVAKLMGLESFPESTQTCDTPQGISGCTTNKNETFAGSRISDEYKQHQSSVSPRTTKGSTLLQSRRDASITNVTPHSRFSLEPTPWRQTDTSQGSQLQASQRNESSTRASNPSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMQRYKESLASNSPSDSTLSESSKVQSPRIRQKDPTSATVEMSNSTQGNKSPIVIMKPAKVARKTNNSASTEMSIHGKSGPNKFCPGSPTNRILVDKLDRQTAKDSPTMRHVKDPISQPFHSVDKSNKMRTSKRMQSSKVPQVINGENSTNSSNIAETRSPRLQKKFGLERRSPPRSPSSDSSSNRRQHNRQSVELSSPSTTPRQKFSTLQDRNERFSEISYQRMNFKNEVDVILPDFDSMRSIDSHSDIEAIHIDHSEKINSNSIQLKGQNQTVSIYSSNNWIFASKSPGLTFFH. 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00683 712 MobiDBLite consensus disorder prediction 549 576 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 423 629 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 591 624 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 479 493 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 314 386 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 38 96 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 423 468 - -
Seca9g00683 712 PANTHER LONGIFOLIA PROTEIN 1 681 IPR033334 GO:0051513
Seca9g00683 712 MobiDBLite consensus disorder prediction 230 272 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 40 96 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 284 303 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 513 527 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 314 387 - -
Seca9g00683 712 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00683 Seca-Chr9 13600526 13605508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00683 134 637 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 35.185 5.34e-41 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00683 - - aprc:113867263 960.674