Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00676 ATGATTAATAGTCCAAAAGAAGCAGAATTTCCACTAAAACAGGAAGGTCTTACATGTGATGAAAAAGCAAAAGCTTCATCAAGCTCATCATCAGCACAATGGCTAAAACTGAAGGATCCAAGAATTGTGAGGGTATCCAGAGCCTTTGGAGGTAAAGACAGGCACAGCAAGGTATGCACAATAAGAGGACTGAGAGATAGAAGGGTGAGGCTTTCAGTCCCTACTGCCATTCACCTATATGATCTTCAAGACAGGCTAGGACTCAATCAACCTAGCAAAGTTGTTGATTGGTTACTCAATGCAGCTAAGCATGAAATTGATGAACTCCCACCTCTGCCAATCCCTCCAGGGAACTTCACCCTTGGTTATCCATCTCTTGCTACTTCAAAAGATGTTACCCACCAAAACACTTCTATCTGGAAATCAAAGTCTAAAGATCAAGTTTCAGTAGAAATGTCCACTGAGAAAGAAAATTGGATGAATAGAAATGAAGGGGATAAACAAGGAAGCAATGATTGTTCTGGTGCACAACAACATGTTTTGCCAAATAATAATAGTAATCTCTTACCAACAAGAGCAAATCATCATCATCATCATCCTTCCTTTTTGGGATTGTTGAACACTATGCCACTTGGTTACCAATTGGATCCTTCAGCTGATGTTACTCAATTGGCAAACCTTGGATTTGTGAACCACCAAACAGATATACACAGCATTAATGTTGTGCCTTTCCCATCCACATTGTCTTTATCAAGTGGGAACACTTCTCAGATCTTGGTGTGTCCTACTGGAGCAACACAGCCATATTTCCCTTCACATGTTGCAGCAATGGAAATGGATCCAAGACAAATCAACCACTATCAAATGCTGAGTAGTTCAAGTTCTCAAAATCTGTTGAGCACCAATTCTCTCATTAATAATCCATCTCAACACCTCATGAGCCAATCAGGGAAACCATTCAGCTTGGGTAGGATGACTGCTCCTAAACTTTTACATTCTCCCAATAGAGGACAGGATTTTCCTTCCAAGTGA 1032 0.405 MINSPKEAEFPLKQEGLTCDEKAKASSSSSSAQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLATSKDVTHQNTSIWKSKSKDQVSVEMSTEKENWMNRNEGDKQGSNDCSGAQQHVLPNNNSNLLPTRANHHHHHPSFLGLLNTMPLGYQLDPSADVTQLANLGFVNHQTDIHSINVVPFPSTLSLSSGNTSQILVCPTGATQPYFPSHVAAMEMDPRQINHYQMLSSSSSQNLLSTNSLINNPSQHLMSQSGKPFSLGRMTAPKLLHSPNRGQDFPSK. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00676 343 MobiDBLite consensus disorder prediction 300 343 - -
Seca9g00676 343 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Seca9g00676 343 MobiDBLite consensus disorder prediction 161 195 - -
Seca9g00676 343 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 310 IPR005333 GO:0003700
Seca9g00676 343 MobiDBLite consensus disorder prediction 164 191 - -
Seca9g00676 343 Pfam TCP family transcription factor 51 179 IPR017887 -
Seca9g00676 343 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00676 Seca-Chr9 13503924 13504955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00676 16 289 TCP Transcription Factor Family AT3G02150 43.357 1.75e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Seca9g00676 TCP 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00676 - - aprc:113867214 441.039