Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00673 ATGTCTCTCCCTTTCACATTCTTTGATGTTCTATGGCTAAGAAGTCCACCAGTGGATCGTATTTTCTTCTATGAATACCAAAACTCAACCTCTTCTTTCTTTGACTCTGTTCTTCCCAATCTCAAACACTCCCTTTCACACACTCTCCAACACTTCCTCCCTCTTGCTGGCAAAATCACTTGGCCACTTGACTCATACTTTCCCATCACCAACTATTCCCCTGGTGATGCCATTTCCTTCACTGTAGCTGAGTCCAATTATGATAACTTCAACAATCTATGTTCAAATTTCTGTGAAGTTGTGGAACTCCACCCCTTAATACCCCACTTGCCCACTTCCCATGAACAAGCATCTGTGTTAGCCCTGCAAGTTACCCTGTTTCCAGGCTCTGGCTTTTGCATTGGAATAGCTTCACACCATGCTGTAATGGATGGAAAGTCTTCAATTTTGTTTCTCAAAGCATGGGCCTATGCATGCTCTAAGCTTCTAGGGGAATCATCATTTTTAACATTTCCTGAGCATCTAACACCCTTCTATGACAGGTCAATGATAGAAGACACTACAGGAATTGGTGCAAGATATGTGAAAGATTGGTTGAACCTTGGTGGACCAAACAATAGAAGCCTCAAGGTGTTGAATTTTGGTAACACTATATCCAATGAGGCAACTAAAGGTTCATTTGAATTAACCTCATCACATATTCAAAAGCTTAAGCAACATGCACAATCTGAGCTGAAAATAAATGGCCGGTTATCAACATTTGCAGTTGCATGTGCTTATGTGTCACAATGTTTAGTCAAAACAGAACAACCAAAGACCAAAGGAGTAGCCTTTACATTCAGTGTGGATTGTAGATCTCGCTTGGACCCTCCAATTCCTTCCACATATTTTGGAAATTGCATTGTTGGCCATAGGTTTATGGATGAGACAAACAAGTTACTAGGAAATGAAGGTTTTATTAATGCTTGTGAGGGGCTGAATGAAGCTTTGAAAAGATTGGAAGATGGAGTGCTGAATGGAGTATCAACTATGTATACACTGATGCAAATTGCGAGGGATAATAGAATCCTCTCCATTGGAGGGTCTCCACGGTTTGAGGTTTATAGTGTTGATTTTGGTTGGGGAAGGCCTAAGAAGGTAGATATGACTCTTATAGGCCAAACAGCAGCATTTTCTCTCTCGGAGAGTAGAAATGACAGTGGAGGAATTGAGATTGGTTTGGTGTTAAACAAAAGCGAAATGGAAGCTTTCTCTTCTCATTTTATTCAACTCTGTTCTCTCTCACCGCCACATGAAACCACCCCAATCTCTCTTCCCTTCACTTTCTTCGACTCACACTGGCTAAGACTCCCTCCTGTTGAGCGTCTCTTCTTCTACGAATACCCAAACCCAACCTCTTCCTTCTTTGACTCTGTTCTTCCAAATCTCAAACACTCCCTTTCACTCACTCTCCAACACTTCCCCCTTCTCGCCGGTAACATCATCTGGCCCACTCAATCACCCCACCCCATCATCAACTACGTCCCTGGCGATGCCGTCCCTTTCACAGTAGCCGAATCCAACGCTGATTTCAACCATCTCTGCTCCAATCTCTGTCAAGTTGACCAAAGACTCCCCTTAATCCCTCGCTTGAAAATTTCCCATGAACAAGCATCTATTTTAGCACTTCAAGTCACTGTTTTCCCGAACTCTGGATTTTGTATTGGGATAACCACACACCACGCAGCTCTTGATGGGAAATCTTCAACTCTGTTTCTTAAAGCATGGGCCTTTATTTGCTCTAACCTTAAAGGGGACCCTTCACCCGTGTCTCTATCATTACCTGAAAATCTAACACCTTTTTTTGACAGATCAGTGATAAAAGACCCTACAGGGATCAACGAGGTTTATCTCAACTCGTGGTTGACTTACGGTGGAGAAACCAACAATCGAAGCTTGAAGGTGTGGGAGACAATTAGTGGAACTCAGACAGATGCGGTTAAAGGTTTGTTTGAATTGACCCCTTCACATATCCAAAAGCTTAAGAAACATGCACAATCCAAGGTTAAAAACAAGGTTCGCTTATCAACATTTTCGGTTACATGTGCTTATTTGTTGGCATGTGTGGTGAAAGTAGACCAACCAAAATCGAATAGAGTAGCTTTTGTGTTCAGTGTGGATTGTAGGCCTCGTTTGGAGCCTCCAATTAAGCCAACTTATTTTGGGAATTGTATTGTGTCCCAGTTGGTTGTGGCTGAGACAAGGGCAATATTAGGGGATGATGGATTTATCAATGCCCTTGAGGGGATCACTGATTTGTTGAGTAGTTTGGAGAATGGGGTGCTGAATGAGGCAGAGAATTGGATGACAAAGATACAATCTGTAATGGGTGATAGGCTATTTTCTACTGCAGGGTCACCTCGGTTTGAGGTCTATAGTATTGATTTTGGATGGGGAAGGCCTAAAAAGGTGGATGTAACTTCCATAGACAAAACAGGAGCATTTTCTCTTTCGGAAAGTAGGAACAATGATGGTGGAGTTGAGATTGGTTTGGCGTTGAACAAGTCTCAAATGGAGACTTTTGCTGAACTTTTTGCTCAAGGACTTGAATCCTTGTAA 2598 0.4234 MSLPFTFFDVLWLRSPPVDRIFFYEYQNSTSSFFDSVLPNLKHSLSHTLQHFLPLAGKITWPLDSYFPITNYSPGDAISFTVAESNYDNFNNLCSNFCEVVELHPLIPHLPTSHEQASVLALQVTLFPGSGFCIGIASHHAVMDGKSSILFLKAWAYACSKLLGESSFLTFPEHLTPFYDRSMIEDTTGIGARYVKDWLNLGGPNNRSLKVLNFGNTISNEATKGSFELTSSHIQKLKQHAQSELKINGRLSTFAVACAYVSQCLVKTEQPKTKGVAFTFSVDCRSRLDPPIPSTYFGNCIVGHRFMDETNKLLGNEGFINACEGLNEALKRLEDGVLNGVSTMYTLMQIARDNRILSIGGSPRFEVYSVDFGWGRPKKVDMTLIGQTAAFSLSESRNDSGGIEIGLVLNKSEMEAFSSHFIQLCSLSPPHETTPISLPFTFFDSHWLRLPPVERLFFYEYPNPTSSFFDSVLPNLKHSLSLTLQHFPLLAGNIIWPTQSPHPIINYVPGDAVPFTVAESNADFNHLCSNLCQVDQRLPLIPRLKISHEQASILALQVTVFPNSGFCIGITTHHAALDGKSSTLFLKAWAFICSNLKGDPSPVSLSLPENLTPFFDRSVIKDPTGINEVYLNSWLTYGGETNNRSLKVWETISGTQTDAVKGLFELTPSHIQKLKKHAQSKVKNKVRLSTFSVTCAYLLACVVKVDQPKSNRVAFVFSVDCRPRLEPPIKPTYFGNCIVSQLVVAETRAILGDDGFINALEGITDLLSSLENGVLNEAENWMTKIQSVMGDRLFSTAGSPRFEVYSIDFGWGRPKKVDVTSIDKTGAFSLSESRNNDGGVEIGLALNKSQMETFAELFAQGLESL. 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00673 865 PANTHER - 424 864 - -
Seca9g00673 865 SUPERFAMILY CoA-dependent acyltransferases 250 422 - -
Seca9g00673 865 Gene3D - 220 423 IPR023213 -
Seca9g00673 865 Gene3D - 656 865 IPR023213 -
Seca9g00673 865 Gene3D - 424 646 IPR023213 -
Seca9g00673 865 Gene3D - 1 208 IPR023213 -
Seca9g00673 865 Pfam Transferase family 431 856 - -
Seca9g00673 865 Pfam Transferase family 19 421 - -
Seca9g00673 865 SUPERFAMILY CoA-dependent acyltransferases 663 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00673 Seca-Chr9 13468836 13478314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00673 456 858 Monolignol Biosynthesis Gene Families AT5G48930 25.180 9.64e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00673 - - tpra:123889238 640.958