Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00616 ATGGAGGGGATGAAGAAGAGGGTGTTGTTAGGGTCACTCTTTCTAGGTGTTGCTGTGCTTCTCATGTTGCCAGGTGCCTCAGCTAAACGGTGGATTGTAGGAGAGAGCAATGGTTGGGGCACCAATTTTAACTACACTACATGGGCTAAGGGCAAGCATTTCTACAATGGTGATTGGCTCTTTTTTGTGTATGATAGGAACCAGATGAATGTGCTAGAAGTGAACAAGACAGATTATGAAAGCTGCAACTCTGATCATCCACTTCACAATTGGACTACTGGAGCTGGAAGAGATGTTGTTCCTCTGAATGTAACCCGCACATACTATTTCATCAGTGGCAAAGGGTTCTGCTTTGGTGGCATGAAGATAGCTGTTCATGTTGAAAACCTCCCACCTCCACCAAAAGCTGCCCCTATAAAATCTGGGGCACCAACCCTTTCCTCTAGTGGCCACATTATTCTCATGCCTGTTGTGTTTGCCATTGGAGCAGCATGGGATGCATTCATTCATTTTTGGTAA 519 0.4528 MEGMKKRVLLGSLFLGVAVLLMLPGASAKRWIVGESNGWGTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRTYYFISGKGFCFGGMKIAVHVENLPPPPKAAPIKSGAPTLSSSGHIILMPVVFAIGAAWDAFIHFW. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00616 172 PANTHER BLUE COPPER PROTEIN 30 136 IPR039391 GO:0009055
Seca9g00616 172 Pfam Plastocyanin-like domain 39 121 IPR003245 GO:0009055
Seca9g00616 172 SUPERFAMILY Cupredoxins 28 127 IPR008972 -
Seca9g00616 172 ProSiteProfiles Phytocyanin domain profile. 29 129 IPR003245 GO:0009055
Seca9g00616 172 FunFam Lamin-like protein 27 130 - -
Seca9g00616 172 Gene3D - 27 130 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00616 Seca-Chr9 12741538 12743449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00616 8 172 Phytocyanin Superfamily AT5G15350 53.293 3.31e-64 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00616 - - mtr:11412511 295.434