Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00614 ATGTTCCATGTCATGTGCCCTCCCCCCACCTATTTATATCCCACACTTAATAGTCCCAAAGGCAATATTGTAGTGATGATGATGGAAAATTGGAGAGTGGTGTTGGTGAGTGTTGTGATCATAGGATGGCTTTCATTTGTGGTCATGGGATTGGGATCAGGTCCAAAGCTTCATAAGGTGGGAGGCTCCAAAGGCTGGCATCCTGATGTCAACTATACTCAATGGTCTGCTCAAGAGCATGTCTATGTTGGTGATTGGCTCTTGTTCAGGTTTGACATAAAATTATACAACGTTCTGGAAGTGAACAAGACAAGCTATGAGAAGTGCATAGACAGGGAATGCATAAAAAACATGACACGTGGTGGTCGTGATGTGGTTGAATTGAGAGAGGAAAAGACATACTACTACCTCTCTAGTGGAGGCTATTGCTTTCATGGAATGAGGGTTGCTGTGCACGTTCACCATCACCAACACCAATTACTACCAGTACTTGCACCAGCATTAGCATTAGCTTCAGCATCAGCACCATCTCCCACCCTCACTATGGTTTCTTCTAGTGGTTCTCTTTTGCCCACCTGCATTTGGATTATTATTATTGCTAATATGCTTTATGTCAATTTAGTTTCAATGGGCATTTTCTAA 642 0.4268 MFHVMCPPPTYLYPTLNSPKGNIVVMMMENWRVVLVSVVIIGWLSFVVMGLGSGPKLHKVGGSKGWHPDVNYTQWSAQEHVYVGDWLLFRFDIKLYNVLEVNKTSYEKCIDRECIKNMTRGGRDVVELREEKTYYYLSSGGYCFHGMRVAVHVHHHQHQLLPVLAPALALASASAPSPTLTMVSSSGSLLPTCIWIIIIANMLYVNLVSMGIF. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00614 213 SUPERFAMILY Cupredoxins 56 154 IPR008972 -
Seca9g00614 213 FunFam Lamin-like protein 54 156 - -
Seca9g00614 213 Pfam Plastocyanin-like domain 68 147 IPR003245 GO:0009055
Seca9g00614 213 Gene3D - 56 162 IPR008972 -
Seca9g00614 213 ProSiteProfiles Phytocyanin domain profile. 56 155 IPR003245 GO:0009055
Seca9g00614 213 PANTHER BLUE COPPER PROTEIN 57 166 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00614 Seca-Chr9 12733455 12735604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00614 31 190 Phytocyanin Superfamily AT2G27035 37.888 4.78e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00614 - - gmx:100788336 214.157