Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00566 ATGGCCTTAAAAACCAGAAGTTCTACCATTCATATAGCTCTTATAGTTGCTTTTCTCACAACCAATGTTGTTTTATCTGATGATAATGTACCAATTCCTGATGGAAAGTCTCAATTAAACGCCTGGTTTAATAAAAATGTGGCTCCCTTTGCTCAAAGAAAGAGCACCTTAGACCCTGCATTGGTGACTGCAGAGAATGGTGCTAAGGTTGTGAGGGTCATGCAAGATGGTAGTGGGGATTTCAAGACCATCACTGATGCCATTAACAGCATACCTAATGGGAACACCAAGCGTGTGATTTTATACATTGGAGGTGCAAATTGTCATGAGAAAATCAAAATTGAAAGGACAAAACCTTTTGTCACCTTGTATGGGGAACCACAAAACATGCCAAACTTGACATATGGGGGTATTGCACAACAATATGGCACTGTTGATAGTGCTACATTGATTGTTGAATCAGATTACTTCGTGGCTGCTAACATCGCCATCTCGAATTCCGCACAAAGACATGATGGAAAAAGGGTAGGAGCTCAAGCAGTTGCACTAAGAATTTCTGGTGACAAGGCAACATTTTATAATTGCAAGCTATTTGGATTCCAAGACACTGTGTGA 615 0.4033 MALKTRSSTIHIALIVAFLTTNVVLSDDNVPIPDGKSQLNAWFNKNVAPFAQRKSTLDPALVTAENGAKVVRVMQDGSGDFKTITDAINSIPNGNTKRVILYIGGANCHEKIKIERTKPFVTLYGEPQNMPNLTYGGIAQQYGTVDSATLIVESDYFVAANIAISNSAQRHDGKRVGAQAVALRISGDKATFYNCKLFGFQDTV. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00566 204 SUPERFAMILY Pectin lyase-like 68 204 IPR011050 -
Seca9g00566 204 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 204 - -
Seca9g00566 204 Gene3D - 21 204 IPR012334 -
Seca9g00566 204 Pfam Pectinesterase 71 204 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00566 Seca-Chr9 11840966 11841710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00566 9 204 Carbohydrate Esterase AT1G69940 54.592 2.70e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00566 K01051 - gmx:100786427 315.079