Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00563 ATGGAAAAGGGTAGTGAGGAATTCTGTAATGGTGGTAATAGTGGTACTAATGAAGTATGTGGTGGTGTTGAGGTAGGTGAAGGACCTAAAAATGTAACTAAGTTGATAGGATTGTCTCTTGAATTTGATTCAAAGGAAGATGCTTTTGAATTTTATAGTAATTATGCTAAATTAGTTGGGGTTTCGATAAGAAAAAACGACATCTATTGTGATGATCGATATAGGATTGTTATGAGAAACATGGTATGTAATAGGAAAGGTGAGAGGTCTGAGAAGCACATGCAAAAGAAGAATAGGTGTCGTGAACCAAGGGCCATAACTCGTACACGTTGTCAAGCAAGTCTCTGTGTTCGTTTAGGTTACATGAGTGGAAAATAG 378 0.3704 MEKGSEEFCNGGNSGTNEVCGGVEVGEGPKNVTKLIGLSLEFDSKEDAFEFYSNYAKLVGVSIRKNDIYCDDRYRIVMRNMVCNRKGERSEKHMQKKNRCREPRAITRTRCQASLCVRLGYMSGK. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00563 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 120 - -
Seca9g00563 125 Pfam FAR1 DNA-binding domain 50 119 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00563 Seca-Chr9 11802877 11803254 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g00563 FAR1 3.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00563 - K17604 cit:127899174 87.0409