Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g00538 | ATGAGACTGAAAGTTCTGATTGGTGCTGCAAAGGGTCTTGCTTTTGTGCATGAGGAAGCTAAAAAGCCATTGATTTATCAAGACTTCAAAACTTCTAATATCCTATTGGATTCAGACTACAATGCAAAACTTTCTGATTTTGGGCTAGTGAAAGATTCCCTAGCGGGTGACTTGACTCATGTGTCAACTAGAGTGATGGGTACTCAAGGGGCGATTGATAAGAAGAGGCCAGTAGCGGAGCATCACCTGGTGGAATGGGCAAGGCCTCAAATAAAGCGTGGAGGAGGAGCACAATACCACCAATTAATGGATCCAAACCTTGATGGCCACTGCTCAATCAAAGGAACACAAAAGGCAATGAGTTGGGCCTATCAGTGCCTTTCAAGAGATTCGAAATCACGACCACTCATGAGTCAGTTCGTTCAAGGGCTACAATGTGCCTCTCAGTATACTACTGACTTATCCCATGCCTCACCATCTTATCACCCCATCATGAAACAAAAACAAGGTCAAGGTGCCCCTTCCTCTTCTAGCTCCAAATCAGCGTCAGGGAATAATATTGCTGCCAACAAATATGGGCTGAGAATTGGGTCATCGGCAAGGAGCACACCAAGTCGCTTTCAAGCCTCTCCGTTGAGCTTTACCCCTCCTTTTCCTTCACCCAAAGCTGGTTGA | 675 | 0.4563 | MRLKVLIGAAKGLAFVHEEAKKPLIYQDFKTSNILLDSDYNAKLSDFGLVKDSLAGDLTHVSTRVMGTQGAIDKKRPVAEHHLVEWARPQIKRGGGAQYHQLMDPNLDGHCSIKGTQKAMSWAYQCLSRDSKSRPLMSQFVQGLQCASQYTTDLSHASPSYHPIMKQKQGQGAPSSSSSKSASGNNIAANKYGLRIGSSARSTPSRFQASPLSFTPPFPSPKAG. | 225 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g00538 | 224 | PANTHER | OS01G0588500 PROTEIN-RELATED | 71 | 146 | - | - | |
Seca9g00538 | 224 | Gene3D | Transferase(Phosphotransferase) domain 1 | 74 | 160 | - | - | |
Seca9g00538 | 224 | MobiDBLite | consensus disorder prediction | 157 | 186 | - | - | |
Seca9g00538 | 224 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 165 | IPR011009 | - | |
Seca9g00538 | 224 | Pfam | Protein kinase domain | 10 | 55 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g00538 | 224 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 24 | 36 | IPR008271 | GO:0004672|GO:0006468 | |
Seca9g00538 | 224 | MobiDBLite | consensus disorder prediction | 198 | 224 | - | - | |
Seca9g00538 | 224 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 73 | - | - | |
Seca9g00538 | 224 | MobiDBLite | consensus disorder prediction | 198 | 213 | - | - | |
Seca9g00538 | 224 | ProSiteProfiles | Protein kinase domain profile. | 1 | 165 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g00538 | Seca-Chr9 | 11177211 | 11178056 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g00538 | 2 | 144 | Glycoside Hydrolase | AT3G07070 | 38.068 | 1.92e-32 | 120 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca9g00538 | Pkinase | 2.3e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g00538 | - | - | mtr:25495290 | 197.978 |