Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00526 ATGGTGAACTCAGTTGTTGACAATAATGCAAGAGAAACTGTGATGGTGAACTCAGTTGTTGACAATATTGCAAGAGAAACTGTGATGGTGAACTCAGTTGTTGACAATATTGCAAGAGAAACTGTGATAGTGAACTCAGTCGTGGACAATATTCCAAGGCATTGCAAGGATCCACCTTTACATGAAGGCTCAGGTCAAGGACAAGGTTGCGGTGTGGAAAGAGTTTCATCTATACCTGAAGCAACAAGTTCAAGTAGAAAAACCATCTTGTCTTTGTTAATAGACCGTAAGCACATCCAGGAAGACGAGCAAGTCTTCTATAAGCTTGATGATAGAAATGAGGGAATTGCAGCTGCAGTGGGACTGAGAGGAAGAATTACCAGAGGTGGAATTCTCTGCAGTTGTTGCCAAAAAGCAATGTCTGTGTGGTCATTTGAAAGAGATGCAAACAGTGATCACAACAAACCCTATGAACGTATTTACATCCTCCAAACACAAGAAAATCTCCAAGATTGCCTCATTGTTTTCTGGCATCATTCAACTGAAAGAGAACGCCGTGAAGAATTATGCTTTTCAACATTGCCCGTGAAGACCCTGTGGAATGTTGAAAAGCAGAATTCTTCACGGGCAATGTTGAAAAGCAAAATTCTTCACGGCGTTCTCTTTCAGTTGAATGAAGCCAAATAG 687 0.4105 MVNSVVDNNARETVMVNSVVDNIARETVMVNSVVDNIARETVIVNSVVDNIPRHCKDPPLHEGSGQGQGCGVERVSSIPEATSSSRKTILSLLIDRKHIQEDEQVFYKLDDRNEGIAAAVGLRGRITRGGILCSCCQKAMSVWSFERDANSDHNKPYERIYILQTQENLQDCLIVFWHHSTERERREELCFSTLPVKTLWNVEKQNSSRAMLKSKILHGVLFQLNEAK. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00526 228 MobiDBLite consensus disorder prediction 57 79 - -
Seca9g00526 228 Pfam Tify domain binding domain 124 173 IPR032308 -
Seca9g00526 228 PANTHER PHD FINGER PROTEIN 12 73 187 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00526 Seca-Chr9 10862431 10863207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00526 83 177 PHD Transcription Factor Family AT4G14920 36.842 2.42e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00526 - - aprc:113870228 126.716