Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00518 ATGAATCATGCCCCAAGTTTCTCTGCTTCACCGTCTTGTCAAAATATGAATGTAGCTTCAATTCCAATTGCTGAAGGTGTAGAGAAATGGGTCGATAATATTCACAGCAATGTTGTGCAACATGGCCAAGAGTGTGTTACTGACTATATACCACACTTGGCAATGGAGTTTGAATCCGAGGTAGCTGCCTATGAATTTTACAATGAGTACAGTAAGAGGGTTGGGTTTGGCATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATGTTGACTTCAAGAAGATTCTCATGCTTCAAAGAGGGCAAACGATGTGTTGACAAACGAGACCACTTGACGAAAGAGCCTAGAGCAGAAACCAGAACAGGATGTGAAGCCCGTATGGTTATTTCACTTGATCGGAAGATAGGGAAATACAAGGTTATTGACTTTATAGCTCAACATAATCACCCTCTTCAATCGACAAAATATGCTTATATGATTCGTTCTCATCGAAAAATTTCTGAGTCACAAGCATCACACATTGTATTGGCAGATGCATCTGGATTGAAACCAAAAGATTTTCATGAATATGTGTCCAAGCAATCTGGTGGAATAGACAGTGTTGGTTACACAAGACAAGACCACAAGAATTACCTTCGAACTAAAAGGAATCAATGTTTAAGGTATGGTGAAGTGGGTGCATTGTTGACGTACTTCAAACAACAAAGTGAAAATCCTTCATTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAATATATTTTGGGCAGATGCACAAATGGTAAATGATTATGGGTACTTTGGTGATGTCATCACTTTTGACACCACATACAAGACAAATAAGGATTATCGACCCCTAGGAGTATTTGTTGGGCTTAATAATCACAGGCATACAGTTGTTTTTGGGGCAACATTGCTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACTTTCCTCAAAGCAATGGGTGGAGAAAAGCCTAAAACCATTCTAACCGATCAAGATGCAGCAATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTATGCACTTGGCATATAAGAGAAAATGCCCTAAGACATGTGAACCACCTTTATCAAAAGAATTCACAATTTTGCTCAGATTTTGAAGCATGCATTGATCTACATGAGGAGGAATGTGAATTTCTGAAGGCATGGAATGAACTACTTGTTGATCATAATGTTTCCGATGATTCATGGCTACATGGGATTTTTCGAGTGAAGGAAAAGTGGGCATGGGCTTATGTTCGAAAAACTTTTACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGCTTTAATGCTGATTTGAAAAACCATTTGAAGTCCGATTTAAATTTGGTACAATTTTTCACACACTTTGAAAGAGTTGTAAATGGAAAGCGAAACAATGAGTCAGAAGCCGAATATGAGTCAATACATAAGCTTCCTAGATTGAAAATGAAGAAGGCCCCTATGCTTGTGCAAGCTGGAAACATTTACACTCCAAAAATTTTTGAGGAGTTCCAAGAGGAATATGAGGAATTTCAAGGCACTTGCATAAAGGAATTGAAAGAAGGGTTGTATACTGTTACAAATTATGATAACAGTAAGGAGCGAAAAGTAGTGGGGATTGTGGGGGATGAAAAGGTTGCATGTGATTGCCGTAAATTTGAGACTCATGGTATCTTATGCAGTCATGCTTTGAAAGTTTTAGATGTGATGAATATCAAGCTAATTCCTCAGCACTATATACTAAAGCGATGGACAAGAGATGCAAGGTTGGGAAGTAACCGAGATTGGAAAGGACAACATATTGAATTGGACATAAAAGCCCATTTCACGAAGAGACACAATGAGTTATGTCCTCGGATGATTAAATTGACAGATAAAGCATCCCAATCTCATGAAACTTACACCTTTTTGTCCAAAGTTTGTGAAGAGTCCAACAAAATAATTGATGTTATGTTGGCTAAAAAGTCTATGGGTGGAGAATCAATTGGAAAGTGTGATATATCCATATCAATTGAAAATGAGAAAATTGACAACAATGTGAACAACATTGATTTTGGTGGGGCGAAAGGCATAAAGAAGTGA 2133 0.3737 MNHAPSFSASPSCQNMNVASIPIAEGVEKWVDNIHSNVVQHGQECVTDYIPHLAMEFESEVAAYEFYNEYSKRVGFGIRREYGNKSKKDGMLTSRRFSCFKEGKRCVDKRDHLTKEPRAETRTGCEARMVISLDRKIGKYKVIDFIAQHNHPLQSTKYAYMIRSHRKISESQASHIVLADASGLKPKDFHEYVSKQSGGIDSVGYTRQDHKNYLRTKRNQCLRYGEVGALLTYFKQQSENPSFFYDFQMDVEEQITNIFWADAQMVNDYGYFGDVITFDTTYKTNKDYRPLGVFVGLNNHRHTVVFGATLLYDETIPSFQWLFETFLKAMGGEKPKTILTDQDAAMAKAISLVMPETFHGLCTWHIRENALRHVNHLYQKNSQFCSDFEACIDLHEEECEFLKAWNELLVDHNVSDDSWLHGIFRVKEKWAWAYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLVQFFTHFERVVNGKRNNESEAEYESIHKLPRLKMKKAPMLVQAGNIYTPKIFEEFQEEYEEFQGTCIKELKEGLYTVTNYDNSKERKVVGIVGDEKVACDCRKFETHGILCSHALKVLDVMNIKLIPQHYILKRWTRDARLGSNRDWKGQHIELDIKAHFTKRHNELCPRMIKLTDKASQSHETYTFLSKVCEESNKIIDVMLAKKSMGGESIGKCDISISIENEKIDNNVNNIDFGGAKGIKK. 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00518 710 ProSiteProfiles WRKY domain profile. 80 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g00518 710 ProSiteProfiles Zinc finger SWIM-type profile. 541 588 IPR007527 GO:0008270
Seca9g00518 710 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 663 IPR031052 GO:0006355
Seca9g00518 710 SMART 26again6 563 590 IPR006564 GO:0008270
Seca9g00518 710 Pfam MULE transposase domain 275 369 IPR018289 -
Seca9g00518 710 Pfam SWIM zinc finger 541 585 IPR007527 GO:0008270
Seca9g00518 710 Pfam FAR1 DNA-binding domain 65 154 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00518 Seca-Chr9 10768713 10772067 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g00518 MULE 9.1e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00518 - - psat:127085847 1101.27