Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00466 ATGGATCACAGGAACAGGTCATCGCTCCTCCTCCTCCTCTTGGGTTTGTGGGTTTTGTTGGCTTCCTCGCAGGTCGAAGAAGACGATGTGAGATGTCTGAGGGGCATCAAGGACTCCCTCAAGGACCCTGAGGGTCGTCTTGCCACGTGGCGGTTCGAGAACAAAACCGTGGGTTTCATCTGCGACTTCGTCGGCGTTTCTTGCTGGAACCAAAGGGAGAACCGGGTCCTGGGTCTGGAGCTGCAAGATATGAAGCTCTCGGGTCGGATCCCAGAGTCCTTGAAGTACTGTGGTAAGAGCTTGCAAAGGTTGAATCTTGGGTCAAACTCACTCGCTTCTGAGATCCCTCCTGAGATCTGTAGTTGGATGCCTTTTTTGGTGTTGATGGATTTGTCTGGTAATGATCTTTCTGGGCCTATACCCTCTACCCTTGTGAATTGTTCTTATTTGAATGAGTTGGTTCTGTCAGATAATCACCTTACTGGTTCCATTCCTTATGAGTTTGGGAGTTTGAGTAGGCTTAAGAGGTTTTCTGTGGCTAACAATCAACTTAGTGGGACTATTCCTGAATTTTTCAGTGGGTTTGATAGGGATAACTTTGCCGGGAATAGTGGGTTGTGTGGGGGTCCTCTTGATAAGTGTGGTGGGATGAGTAAGAAGAATCTTGCAATTATTATAGCTGCTGGGGTGTTTGGTGCTGCTGCTTCTTTGTTATTGGCTTTTGGGTTGTGGTGGTGGTATCATTTGAGGTTGAGTGGGAGGAGGAAGAAAGGAGGGTATATGGTTGGGGGTGTTGATAATTGGGCTGTGAGGTTGAGGGGTCATAAGCTTGCTCAGGTAACTCTTTTTCAGAAACCAATTGTGAAGGTTAAGCTGGGGGATTTGATGGCTGCAACTAATAATTTCAGTGCTGAGAATGTTCTTATTTCTACAAGGACAGGAACTACTTATAGGGCTGATCTACCTGATGGCTCCACCCTCGCGGTGAAGCGGTTGAACACCTGTAAGATTGGGGAGAAGCAATTTCGGATGGAGATGAATCGGCTAGGCCAAGTTAGGCACCCAAATTTGGCACCTCTGTTGGGTTTCTGTGTTGTGGAAGAGGAGAAGCTGCTGGTTTATAAGCACATGTCGAATGGGACTCTATATTCCTTGTTGCATAAGTATAACAATGCATTGGATTGGATGATGAGGTTCAGGATAGGCTTGGGCGCAGCTAGGGGTCTTGCCTGGCTGCACCATGGGTGCCATCCTCCAATTATACAGCAAAACATTTGTTCCAATGTGATTCTTGTTGATGAAGAATTTGATGCTCGGTTAATGGACTTTGGACTTGCAAGGCTTATGACATCTGACTCTAATGGTAGTTTTGTGAATGGAGATTTGGGGGAACTTGGATATATAGCTCCGGAATATCCAAGTACCCTGGTTGCTTCATTGAAAGGGGATGTGTATGGATTTGGGGTTTTGCTTTTGGAGTTGGTCACTGGGCGCAAACCTCTTGAGGTGAGCAATGGTGAGGAAGAATTTAAGGGTAACTTAGTGGATTGGGTGAATATGCATTCAAGTTCAGGTAGAATCAAGGATTGCATTGATAAAACCATATGTGGGAAGGGACATGATGAGGAAATTCTGCAGTTTCTGAAAATTGCATCTAGTTGTGTGGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATTCATTAAAGAGTATATCCAAAGACCACAGTTTCTCTGAACATGACGATGAATTTCCCTTGATCTTTGGTAAGCCAGAAAATGAACCGGCATAG 1803 0.4559 MDHRNRSSLLLLLLGLWVLLASSQVEEDDVRCLRGIKDSLKDPEGRLATWRFENKTVGFICDFVGVSCWNQRENRVLGLELQDMKLSGRIPESLKYCGKSLQRLNLGSNSLASEIPPEICSWMPFLVLMDLSGNDLSGPIPSTLVNCSYLNELVLSDNHLTGSIPYEFGSLSRLKRFSVANNQLSGTIPEFFSGFDRDNFAGNSGLCGGPLDKCGGMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSGRRKKGGYMVGGVDNWAVRLRGHKLAQVTLFQKPIVKVKLGDLMAATNNFSAENVLISTRTGTTYRADLPDGSTLAVKRLNTCKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLYSLLHKYNNALDWMMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARLMDFGLARLMTSDSNGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNGEEEFKGNLVDWVNMHSSSGRIKDCIDKTICGKGHDEEILQFLKIASSCVVSRPKDRWSMYQVYHSLKSISKDHSFSEHDDEFPLIFGKPENEPA. 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00466 600 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 26 215 - -
Seca9g00466 600 Pfam Protein tyrosine and serine/threonine kinase 323 569 IPR001245 GO:0004672|GO:0006468
Seca9g00466 600 SUPERFAMILY Protein kinase-like (PK-like) 281 572 IPR011009 -
Seca9g00466 600 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Seca9g00466 600 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 376 - -
Seca9g00466 600 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 377 594 - -
Seca9g00466 600 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 66 192 - -
Seca9g00466 600 Gene3D Phosphorylase Kinase; domain 1 264 376 - -
Seca9g00466 600 Gene3D Ribonuclease Inhibitor 26 215 IPR032675 -
Seca9g00466 600 ProSiteProfiles Protein kinase domain profile. 302 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00466 600 SUPERFAMILY L domain-like 27 197 - -
Seca9g00466 600 Gene3D Transferase(Phosphotransferase) domain 1 377 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00466 Seca-Chr9 9929365 9931167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00466 9 598 Receptor kinase-like Gene Family AT3G28450 64.441 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Seca9g00466 PK_Tyr_Ser-Thr 1.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00466 - - gmx:100810378 958.362