Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00465 ATGTTGTGCTGCGGAGGTGCAAAGGAGGAGAGTAGTGGTCCACCTGCAAACCAATACACTGCACCACCTAGAGGGGGTAACACATACGATGGAGGTGGAGGCCCTGATAGAGGAGAGCCAAGGGGCAATGTTGCTAAGAGTGGTGCTCCACAGAAAGTTTTACCAATTGAGATACCCTCTATGCCATTGGATGAGATAAATAGGTTAACAGGAAATTTTGGTTCAAAGGATTTTATTGGTGAAGGTTCCTATGGGAGGGTTTTCTATGCAAAATTGAGTGATGGAACTGAAGCTGCAGTTAAGAAGCTTGATACCAGTTCTTCACAAGAACCTGACACTGATTTTGCTGCTCAGTTATCAGTTGTTTCAAGACTGAAGCATGATCATTTTGTGGAGTTGATTGGATATTGCCTAGAGGCAGACAACAAAATATTGGTTTATCAATATGCAAGTTTGGGTTCATTGCATGACATATTACATGGAAGGAAGGGTGTACAAGGAGCATGA 507 0.43 MLCCGGAKEESSGPPANQYTAPPRGGNTYDGGGGPDRGEPRGNVAKSGAPQKVLPIEIPSMPLDEINRLTGNFGSKDFIGEGSYGRVFYAKLSDGTEAAVKKLDTSSSQEPDTDFAAQLSVVSRLKHDHFVELIGYCLEADNKILVYQYASLGSLHDILHGRKGVQGA. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00465 168 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Seca9g00465 168 SUPERFAMILY Protein kinase-like (PK-like) 51 164 IPR011009 -
Seca9g00465 168 ProSiteProfiles Protein kinase domain profile. 73 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00465 168 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Seca9g00465 168 MobiDBLite consensus disorder prediction 1 51 - -
Seca9g00465 168 Pfam Protein tyrosine and serine/threonine kinase 78 162 IPR001245 GO:0004672|GO:0006468
Seca9g00465 168 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 168 - -
Seca9g00465 168 FunFam probable protein kinase At2g41970 46 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00465 Seca-Chr9 9923423 9924336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00465 63 166 Receptor kinase-like Gene Family AT3G55950 40.741 2.48e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Seca9g00465 PK_Tyr_Ser-Thr 4.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00465 - - gmx:100812507 295.049