Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g00465 | ATGTTGTGCTGCGGAGGTGCAAAGGAGGAGAGTAGTGGTCCACCTGCAAACCAATACACTGCACCACCTAGAGGGGGTAACACATACGATGGAGGTGGAGGCCCTGATAGAGGAGAGCCAAGGGGCAATGTTGCTAAGAGTGGTGCTCCACAGAAAGTTTTACCAATTGAGATACCCTCTATGCCATTGGATGAGATAAATAGGTTAACAGGAAATTTTGGTTCAAAGGATTTTATTGGTGAAGGTTCCTATGGGAGGGTTTTCTATGCAAAATTGAGTGATGGAACTGAAGCTGCAGTTAAGAAGCTTGATACCAGTTCTTCACAAGAACCTGACACTGATTTTGCTGCTCAGTTATCAGTTGTTTCAAGACTGAAGCATGATCATTTTGTGGAGTTGATTGGATATTGCCTAGAGGCAGACAACAAAATATTGGTTTATCAATATGCAAGTTTGGGTTCATTGCATGACATATTACATGGAAGGAAGGGTGTACAAGGAGCATGA | 507 | 0.43 | MLCCGGAKEESSGPPANQYTAPPRGGNTYDGGGGPDRGEPRGNVAKSGAPQKVLPIEIPSMPLDEINRLTGNFGSKDFIGEGSYGRVFYAKLSDGTEAAVKKLDTSSSQEPDTDFAAQLSVVSRLKHDHFVELIGYCLEADNKILVYQYASLGSLHDILHGRKGVQGA. | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g00465 | 168 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 102 | IPR017441 | GO:0005524 | |
Seca9g00465 | 168 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 164 | IPR011009 | - | |
Seca9g00465 | 168 | ProSiteProfiles | Protein kinase domain profile. | 73 | 168 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g00465 | 168 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 149 | - | - | |
Seca9g00465 | 168 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Seca9g00465 | 168 | Pfam | Protein tyrosine and serine/threonine kinase | 78 | 162 | IPR001245 | GO:0004672|GO:0006468 | |
Seca9g00465 | 168 | PANTHER | PTO-INTERACTING PROTEIN 1-LIKE | 2 | 168 | - | - | |
Seca9g00465 | 168 | FunFam | probable protein kinase At2g41970 | 46 | 149 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g00465 | Seca-Chr9 | 9923423 | 9924336 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g00465 | 63 | 166 | Receptor kinase-like Gene Family | AT3G55950 | 40.741 | 2.48e-22 | 90.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIII | Seca9g00465 | PK_Tyr_Ser-Thr | 4.3e-14 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g00465 | - | - | gmx:100812507 | 295.049 |