Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00428 ATGGTTTTTGTTGAAAATTTCCTAATCAACGCCATCCTTTCTTTAATCTTCGTATGTTTATTCTTGTATCATCCATTCAAAGTTGCTCAAGGCAAAAGGACTCCCACAGCCAAAGGTGCATGGCCAATACTCGGTCACTTACCACTCTTTATCGGTGCACCAACACCCCATAAAACCTTGGGTACCTTGGCTGACAAGCATGGATCCTTATTCACCTTAAAGCTTGGTGGCACACGTGCTGTGGTACTTAGCAACTGGGAAATGGTCAAGGAATGCTTCACCATAAACGACATGGTCGTTTCCTCTCGCCCCCAACTTATTGCAAGTGAACACATGACCTACAACGGCGCTGCGTTTGGCCTTGCACCTTATGGTCCTTATTGGCGCCAACTACGTAAGATTGTGAATTTAGAGATCCTTACTAATCGCCGTGTAGAGCAATTTCGCCTTGCTCGTGTTTCGGAAGTTGACACTTCGATTAAAGAGCTCTTCAATGTTTGGTCCAACAAAAAGAACGAGTTTGGCTATGTGTTAGTGGAATTGAAACAATGGTTTAGTCAATTGACGTTCAACATGATGCTAAGAATGGGCATTGGGAAGAGATATTTTGGTGCTACAAATGTGGTTGATGAGAAAGAAGCGCAGAGCTGTATAAAAGCTTTAAAGGAGTTCATGCGTTTGATGGGTGTATTCACGGTGGCAGATGCCATTCCTTGTTTGAGATGGCTTGATTTTGGTGGCCATGAGAAGGCCATGAAAGAAACTGCCAAGGAATTGGATAAAATTTTAGATAAATGGTTAGAGGAGCACCGCCGTAACAGGGCTTTGGATGAAAAGGTTGAATGTGATCAAGACTTCATGGATGTGATGCTTTCATTACTTGAAGTAACAACTATTGATGGGTTTCATGCTGATACCATAATCAAAGCCACGATTTTGACACTAATGTCGGCAGGAACTAACACAACTGGCGTAACTCTTACATGGGCAATATGTTTGTTATTAAGAAATCCACTTATATTGGAAAAAGCAAAGGAAGAACTTGACACTCATGTTGGGAAAGAGAGGTGCGTAAGCGAATCAGATATAAGTAAGTTGGTATATCTTCAAGCCATAGTCAAAGAAACACTAAGATTGTATCCACCGGGCCCTCTCTCAGGACCTCGTGAATTCACCAAGAATTGCACTTTAAGTGGCTACAATATTAAAAAGGGAACCCGATTAATTGTGAATCTTTGGAAAATTCACAGAGATCCTAGTGTTTGGACAGATCCATTGGAGTTCAAGCCAGAAAGTTTCCTTACCACTCATAAAAATACAGATGTTAGGGGTTGTCATTTTCAGCTATTACCATTTGGATGTGGGAGGAGGATTTGTCCGGGAATATCCTTTGGCCTTCAAATGATTCATTTAACTCTGGCTAGTTTTTTGCATTCCTTTGAAATGTTAAACCCTTCACCTGAGCTTGTTGATATGACTGAAATTTTTGGATTAACCAATGCCAAAGCTACTCCGCTTGAGATTCTTCTTAAACCACGTTTGTCTCCCAATTGTTACTAA 1560 0.4109 MVFVENFLINAILSLIFVCLFLYHPFKVAQGKRTPTAKGAWPILGHLPLFIGAPTPHKTLGTLADKHGSLFTLKLGGTRAVVLSNWEMVKECFTINDMVVSSRPQLIASEHMTYNGAAFGLAPYGPYWRQLRKIVNLEILTNRRVEQFRLARVSEVDTSIKELFNVWSNKKNEFGYVLVELKQWFSQLTFNMMLRMGIGKRYFGATNVVDEKEAQSCIKALKEFMRLMGVFTVADAIPCLRWLDFGGHEKAMKETAKELDKILDKWLEEHRRNRALDEKVECDQDFMDVMLSLLEVTTIDGFHADTIIKATILTLMSAGTNTTGVTLTWAICLLLRNPLILEKAKEELDTHVGKERCVSESDISKLVYLQAIVKETLRLYPPGPLSGPREFTKNCTLSGYNIKKGTRLIVNLWKIHRDPSVWTDPLEFKPESFLTTHKNTDVRGCHFQLLPFGCGRRICPGISFGLQMIHLTLASFLHSFEMLNPSPELVDMTEIFGLTNAKATPLEILLKPRLSPNCY. 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00428 519 PANTHER CYTOCHROME P450 82C3-RELATED 15 519 - -
Seca9g00428 519 CDD CYP82 68 513 - -
Seca9g00428 519 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 Pfam Cytochrome P450 39 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Seca9g00428 519 Gene3D Cytochrome P450 26 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 FunFam Cytochrome P450 82C4 26 511 - -
Seca9g00428 519 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00428 519 SUPERFAMILY Cytochrome P450 40 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00428 Seca-Chr9 9211602 9214325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00428 15 519 Cytochrome P450 AT4G31970 48.728 4.30e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00428 - - gmx:100793075 756.133