Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00427 ATGGATTTAGTCCTAAACCCCACTACCGTTGCAATCTTTTCTCTAATTTTATTGTGTTTGTTTCTGTTTCGCCTCTCAAAAGTTTCTCATGGCAGAGAGGCTCCAACAGTTGCAGGAGCATGGCCAATACTTGGTCACCTCCCATTGTTAAGTAGTTCAAAGACACCCCATAAAACCTTGGGTGCTTTAGCTGACAAGTATGGACCCATATTCACTATCAAGCTAGGTACCACACGGGGTTTGGTAATCAGCAATTGGGAAATGGCCAAGGAATGCTTCACCACAAACGACATTGCCGTTTCCTCTCGGCCTAAGCCTATTGCAGCAGAACTCATGTCGTACAACCTTGCTTTCATCGGTTGGTCACCATACGGGTCCTATTGGCGTGAATTGCGTAAGCTTGTTACCTCTGAGTTCCTCTCTAACCGCCGAGTTGAGTTACTAAGCCAAATTCGTGTCTCTGAAGTTCAAACTTCGATTAAGGAGTTGTTTGATGTGTGGTCCAGCCAGAAGAACGAGTCTGGCTACTTGATGATAGAGCTGGACCAGTGGTTCTCGCAGTTGACACTCAACATGGTTCTTAGAATGGTCATTGGGAAGAGATATTGCGGTGTTATAGATGTGGCGAATGACGGTAAAGCGGAAAGGTGTTTGAAAAATATAAGTGAGTTTATGCGTTTGATGGGGACTTTCATAGTGGGAGATGCTGTCCCTTTTCTAAGATGGTTGGATGTTGGGGGCTATGAGAAGGCCATGAAAGAAACAGCAAAGGAATTTGACAAAATGTTGAGCGAATGGTTAGAAGAGCACCGTCAAAAGAGGGCTGAAAAGGATGTGAGGGATAGAGATTTTATGGACGTGATGCTTTCAGTGCTTAATGACAGGCAGATTGATGGGGTTGATGCTGATACAATATACAAAGCCACAACATTGGAATTGATTATAGGAGGATCTGACACAACTGCTGTTACCCTTACATGGGCAATGTCTTTGCTATTGAGAAATCCTCATGTATTGGAAAAGGCTAAAGAAGAACTTAACACGCAAATTGGGAAAGATAGTTGCATAAGTGAGCCAGATATAAAAAAGTTGGTATATTTACAAGCTATAGTTAAAGAGACATTAAGATTGTACCCACCTGCCACTCTCTCATCACCTCGTGAAGTCAGAGAGAGTTGCACTATAGGTGGTTATTATGTCAGAAAGGGTACTCGACTCATGCCAAACCTATGGAAAATCCACAGAGACCCAAGTGTTTGGTCAGACCCGTTGGAGTTCAAACCCGAAAGGTTTCTTACCACTCACAAAGAAGTTGATGTTAGGGGTCATCATTTTGAGCTGTTACCATTTGGAAGTGGGAGACGGATTTGTGCTGGAATGTCCCTTGGTCTGCAAATGATTCATTTCACTCTCGCTAATCTTTTGCGTTCCTTTGACTTCTTAAATCCATCTTCTGAACCAATTGATATGACTGAAATATTTGAATTCACCAACACCAAAGCTACTCCACTTAAGATTTTGATTAAACCATGTTTGCCTCCCAACTCTTTTATATGA 1557 0.4245 MDLVLNPTTVAIFSLILLCLFLFRLSKVSHGREAPTVAGAWPILGHLPLLSSSKTPHKTLGALADKYGPIFTIKLGTTRGLVISNWEMAKECFTTNDIAVSSRPKPIAAELMSYNLAFIGWSPYGSYWRELRKLVTSEFLSNRRVELLSQIRVSEVQTSIKELFDVWSSQKNESGYLMIELDQWFSQLTLNMVLRMVIGKRYCGVIDVANDGKAERCLKNISEFMRLMGTFIVGDAVPFLRWLDVGGYEKAMKETAKEFDKMLSEWLEEHRQKRAEKDVRDRDFMDVMLSVLNDRQIDGVDADTIYKATTLELIIGGSDTTAVTLTWAMSLLLRNPHVLEKAKEELNTQIGKDSCISEPDIKKLVYLQAIVKETLRLYPPATLSSPREVRESCTIGGYYVRKGTRLMPNLWKIHRDPSVWSDPLEFKPERFLTTHKEVDVRGHHFELLPFGSGRRICAGMSLGLQMIHFTLANLLRSFDFLNPSSEPIDMTEIFEFTNTKATPLKILIKPCLPPNSFI. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00427 518 FunFam Cytochrome P450 82C4 24 509 - -
Seca9g00427 518 Pfam Cytochrome P450 38 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 CDD CYP82 68 511 - -
Seca9g00427 518 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 SUPERFAMILY Cytochrome P450 40 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PANTHER CYTOCHROME P450 82C3-RELATED 12 516 - -
Seca9g00427 518 Gene3D Cytochrome P450 26 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00427 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00427 Seca-Chr9 9188361 9191219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00427 5 518 Cytochrome P450 AT4G31940 46.476 8.33e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00427 - - gmx:100779366 732.635