Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00425 ATGGATTTAGTCCTAAACACTTACACCACTACAATTGCAATCCTTTCTCTAATATTCTCTGTCTATCTATTTCTGTTTCGTCCCTCCAAAGTTGGTTATGGTAGAGAAGCTCCTTTAGTCGCAGGTGCATGGCCAATAATCGGTCACCTCCCACTATTGAGGGGATCACAAAAACCCCATAGAACATTGGGTAGCATGGCTGACAAGTACGGACCCATATTCACCATCAAGCTTGGTGCCACACCAACGTTGGTGCTCAGCAACTGGGAAATGGCGAAGGAATGCTTCACCACAAACGACGTTGTCGTTTCCTCTCGCCCCAAGCTTGTTGCAACTGAACATTTGGCCTACAACGGAGCCATGTTTGGCTTTGCACCTTATGGTCCCTATTGGCGACAAGTGCGTAAGATTGTTATCTTAGAGCTCCTCTCCAATCGCCGAATCGAGTTGCTAAGTCACACTCGTGTCTCTGAACTTCAAACTTCGATCAAAGAACTGTACAGTGTTTGGTTAAACAAAAAGAACGATTCTGGTTACGTGTTGGTGGAGCTGAAGCAGTGGTTTTCACAGTTGACATTCAACATGATTCTTAGGATGATGGCTGGGAAGAGGTATTTTGGTACTATGGATGTGGCTAATGAGAAAGAAGCAGAGAGGTTTTTGAAAGGTTTGAACAAATTCTTGTGTTTGTTGGGGGTGTTCACTGTAGGAGATGCTGTTCCTTCTCTAAGGTGGTTAGATTTGGGTGGCCATGAGAAAGCCATGAAAGAAACTGCAAAGGAATTGGATAATGTTGTGAGTGAATGGTTGGAAGAGCACCGCCAAAAGAGGGCTTCAAGTGCGAGCAACGACCAAGACTTCATTGATGTGATGCTTTCGGTTCTTGAAGCCAAAAAGATTGACGGATTTGAGTTTGACGCTGATACTATACACAAATCCACAACATTGGAATTAATTTTGGCAGCAACCGACACAACCACTATTACACTTATATGGGCAATGTGTTTACTATTGAGAAATCCTCTCGCATTAGAGAAAGCAAAAGAAGAACTCAATAGCCATGTTGGGGATGAGAGATGTGTGAGTGAGTTAGATATAAACAAACTTGAGTACCTTCAAGCAATAGTTAAAGAAACGTTAAGATTGTATCCACCAGCCCCACTCTCATTATCTCACGAGTTTACAGAGAATTGTAGTTTAGGTGGTTACCATGTTAGAAAAGGAACTCGACTTATTACAAATTTGTGGAAGATTCACAAAGATCCTAGTGTTTGGCCAGATCCATTGGAGTTTAAACCAGAAAGGTTCTTGACCACTCATAAAAGTGTTGATGTTAGGGGTCAACATTTTGAGTTGTTACCATTTGGAAGCGGTAAAAGAAGTTGTCCCGGAATATCCTTTTCGCTTCAAATAGTTCATTTCACTCTGGCTAGCTTTTTGCACTCCTTTCAAATCTTAAATCCTTCTCCTGAATCTGTTGATATGACTGAAACCTTTACAACGACCACCACCAAAGCAACACCACTTGAGATTCTCATCAAGCCACGTACGTTTGTCTCCCAAATGTTATGA 1572 0.4205 MDLVLNTYTTTIAILSLIFSVYLFLFRPSKVGYGREAPLVAGAWPIIGHLPLLRGSQKPHRTLGSMADKYGPIFTIKLGATPTLVLSNWEMAKECFTTNDVVVSSRPKLVATEHLAYNGAMFGFAPYGPYWRQVRKIVILELLSNRRIELLSHTRVSELQTSIKELYSVWLNKKNDSGYVLVELKQWFSQLTFNMILRMMAGKRYFGTMDVANEKEAERFLKGLNKFLCLLGVFTVGDAVPSLRWLDLGGHEKAMKETAKELDNVVSEWLEEHRQKRASSASNDQDFIDVMLSVLEAKKIDGFEFDADTIHKSTTLELILAATDTTTITLIWAMCLLLRNPLALEKAKEELNSHVGDERCVSELDINKLEYLQAIVKETLRLYPPAPLSLSHEFTENCSLGGYHVRKGTRLITNLWKIHKDPSVWPDPLEFKPERFLTTHKSVDVRGQHFELLPFGSGKRSCPGISFSLQIVHFTLASFLHSFQILNPSPESVDMTETFTTTTTKATPLEILIKPRTFVSQML. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00425 523 PANTHER CYTOCHROME P450 82C3-RELATED 14 517 - -
Seca9g00425 523 FunFam Cytochrome P450 82C4 28 514 - -
Seca9g00425 523 Pfam Cytochrome P450 42 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 SUPERFAMILY Cytochrome P450 43 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 Gene3D Cytochrome P450 34 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 CDD CYP82 71 516 - -
Seca9g00425 523 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00425 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00425 Seca-Chr9 9157880 9162139 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00425 5 516 Cytochrome P450 AT4G31970 50.193 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00425 - - gmx:100793075 685.256