Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00421 ATGGCCAAAGAATGCTTCACCATAAATGACATGGCTGTTTCCTCTCGCCCCAACCTTGTTGCAACTCAACATATGACCTACAACGGAGCCATGTTTGGCTTTGCACCTTATGGTCCTTATTGGCGCCAATTACGCAAAATTGCAACTTTACAAATCCTTAGTAATCGCCGTGTTGAACAACTACGCCATGTTCGTGCCTTGGAAGGTCAAACTTCAATTAAAGAGCTCTTTAATGTTTGGTCAAGCAAAAAAAATGGGGATGGCTATGTCTTGGTGGAGTTGAAGCAATGGTTTACTCAATTGACATTCAACATGGTTCTTCGAATGGCCGTTGGGAAACGATATTTCGGTGCTATGAATATGGTTGATGAGCAAGAAGCACAAAGGTCTATAAAAGCTTTAAAGGAGTACATGCGTTTGATGGGTGTATTCACAGTGGCAGATGCTATTCCTTATTTGAGATGGTTTGATTTTGGTGGCCATGAGAAGGCCATGAAAAAAACTGCCAAGGAATTGGACAAAATTGTAGGTGAGTGGTTAGAGGAGCACCGCCAGAACAGAGCTTTGGGTGAAAAGATAGAACGTGATCAAGATTTCATGGATGTGATGATTTCATTGCTTGAAGGAACAACAATTGAAGGGTTTGATGCTGATCCCATAATCAAGTCCACAACATTGGCACTAATTTTGGGAGGAACTGACACAAGCTCTGTTACCCTTACTTGGGCACTATGTTTACTATTGAGAATTAATCCTCTTGTATTGGAAAAAGCAAAAGAAGAACTTGACACTCAAGTTGGGAAAGAGAGATGTGTAACTGAGTCAGATATGAGTAAGTTGGTATATCTTCAGGCCATAGTTAAAGAAACATTAAGACTACATCCACCTGGCCCTCTTTCAGGACCTCGTGAATTCTCAAAGAATTGCACTTTAGGTGGGTATAATGTTAGAAAAGGAACTAGGCTAATTGTGAATCTTTGGAAGATTCAAACAGATCCTAGTGTTTGGTCAGATCCATTGGAGTTCAAACCAGAAAGGTTTCTTACCACTCATAAAGATGTTGATGTTAAGGGTTCTCATTTTGAGCTATCACCATTTGGATATGGCAGGAGGATTTGTCCGGGAATATCCTTTGCTCTTCCAATGGTTCATTTAACTCTGGCTAGTTTTTTGCACTCCTTTGAAATCTTAAATCCATCAACTGAACTTGTTGATATGACTGAAACCTTTGGATTAACCAACACCAAAGCTACTCCACTTGAGATTCTCGTTAAACCACGTTTGTCTCCCAAGTTGTTATGA 1302 0.4025 MAKECFTINDMAVSSRPNLVATQHMTYNGAMFGFAPYGPYWRQLRKIATLQILSNRRVEQLRHVRALEGQTSIKELFNVWSSKKNGDGYVLVELKQWFTQLTFNMVLRMAVGKRYFGAMNMVDEQEAQRSIKALKEYMRLMGVFTVADAIPYLRWFDFGGHEKAMKKTAKELDKIVGEWLEEHRQNRALGEKIERDQDFMDVMISLLEGTTIEGFDADPIIKSTTLALILGGTDTSSVTLTWALCLLLRINPLVLEKAKEELDTQVGKERCVTESDMSKLVYLQAIVKETLRLHPPGPLSGPREFSKNCTLGGYNVRKGTRLIVNLWKIQTDPSVWSDPLEFKPERFLTTHKDVDVKGSHFELSPFGYGRRICPGISFALPMVHLTLASFLHSFEILNPSTELVDMTETFGLTNTKATPLEILVKPRLSPKLL. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00421 433 CDD CYP82 1 427 - -
Seca9g00421 433 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS P450 superfamily signature 364 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS P450 superfamily signature 231 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 Pfam Cytochrome P450 4 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 FunFam Cytochrome P450 82C4 1 425 - -
Seca9g00421 433 PRINTS E-class P450 group I signature 1 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS E-class P450 group I signature 363 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS E-class P450 group I signature 284 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS E-class P450 group I signature 325 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS E-class P450 group I signature 101 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS E-class P450 group I signature 241 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PRINTS E-class P450 group I signature 373 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 PANTHER CYTOCHROME P450 82C3-RELATED 1 431 - -
Seca9g00421 433 Gene3D Cytochrome P450 1 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00421 433 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 366 375 IPR017972 GO:0005506|GO:0016705
Seca9g00421 433 SUPERFAMILY Cytochrome P450 1 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00421 Seca-Chr9 9107860 9109884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00421 1 433 Cytochrome P450 AT4G31940 53.075 3.29e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00421 - - gmx:100805047 657.907