Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00411 ATGTACATCGATCCCTTACCTTCACCGCTGCCAACAAGGTCAAGCAGACTTTCGACTCGAAATCTCCCTGTTCAGGTTCCAACAACTGCCCAGGCTCTGGTCGTGTGCGACCAGCGCTGCTCAGGATATTTGCTTACCAGGAACAGATTGATGCAGTCCCTTGAATTGTATACTGACATGGAAATATTCTTCACTTTGATACTTTCAAGGGACAAACCAAAAGGGAAAGAAGGTATGAAATATGAAAGGCCTATTGATCCTACTTCAGGGGATCAACCTTTGTACAACGAAGAAAAGACTGTTTTTGTCACTGTAAATGGGGAGATATACAATCATAAGCAATTGAGACAGAAATTGGATTCCCATCAATTTCGAACTGGTAGTGATTGTGAAGTGATTGCCCATTTTTATGAAGAATATGGAGAATTTGTTGATATGTTGGATGGGATGTTCTTCTTTGTCCTTATTGATACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCCATTGGGATTACCCCTCTTTACTTGGGCTTTGGTCATGATGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTGATTGACGATTGTGAGAGATTCATATCTTTTCCTCTGGGGCATATATATTCCATCAAACAGGGAGGATTAAGAAGGTGGTACAATCCACCATGTCTTCTTCGAAAATCATGGGATGTTATCTCTTCTCGTCTAGCAGCCATCATTTCAGAGGTGGGAAAGGGACTGTCCTGGAAGGTTTATAAAGAACCCGTTTCAGAGTTGAAGATTGTCAAAGGGAATGAAGTGGCAATGAAGAAATTGCGTGACTTTGAGGAGTATGTTTATGGTTTGCTCAAGAATTATGCAGTGTCCCCAGAGATCTTCTTGGCGCCAAGCAGCTATATGGGTTGGTGGAATGAATATAAAGCAATTGTGGGAACTTCACATAATCCAAATCTTGCAAACTTTATGAACGATGCAAGAAAGCGTGATCAGTATGCTTTGGGAACTTATGATTTCCCAACCATGCCATCTAATTAA 1041 0.4092 MYIDPLPSPLPTRSSRLSTRNLPVQVPTTAQALVVCDQRCSGYLLTRNRLMQSLELYTDMEIFFTLILSRDKPKGKEGMKYERPIDPTSGDQPLYNEEKTVFVTVNGEIYNHKQLRQKLDSHQFRTGSDCEVIAHFYEEYGEFVDMLDGMFFFVLIDTRDKSFIAARDAIGITPLYLGFGHDGSTWFASEMKALIDDCERFISFPLGHIYSIKQGGLRRWYNPPCLLRKSWDVISSRLAAIISEVGKGLSWKVYKEPVSELKIVKGNEVAMKKLRDFEEYVYGLLKNYAVSPEIFLAPSSYMGWWNEYKAIVGTSHNPNLANFMNDARKRDQYALGTYDFPTMPSN. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00411 346 Pfam Glutamine amidotransferase domain 85 195 IPR017932 -
Seca9g00411 346 PANTHER ASPARAGINE SYNTHETASE 84 226 - -
Seca9g00411 346 CDD AsnB 85 222 IPR033738 -
Seca9g00411 346 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 81 222 IPR029055 -
Seca9g00411 346 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 1 215 IPR017932 -
Seca9g00411 346 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 84 223 IPR029055 -
Seca9g00411 346 Pfam Enhanced disease susceptibility 1 protein EP domain 265 323 IPR041266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00411 Seca-Chr9 8884838 8887593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00411 100 194 PRT Gene Family AT2G16570 33.962 2.32e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00411 K01953 - gmx:100788806 266.929