Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00381 ATGGCAAGAAGATGGTCCTTTTACAGGGATTTGCTGCCAATTGTGGTGATTATAGGCAATGAATGCAATGACATGGGCACTTTAACTCTGTTCAAAGCAGCCACCCTCCAAGGAATGAACAATCATGTCTTTGTTGCCTATGCTTATTCTGTTTCCACTACTGTGCTCCTTCCTCTCTATTTTTTCACCAAAAGATCAAGAGTGGTTCCTCCACTCAGTTTCCCCATCCTATCCAAAATGGTTCTTCTTGGAGTCATAGGGAGTTCATCCCAGATCCTTGGATATGCAGGCATTAATTACAGTTCTCCAACACTTGCTTCATCAATCGGCAATCTTGTACCTGCTTTCACCTTCCTTCTTGCCGTCACTTTCAGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGTCAAGCTAAGGTAGTGGGAAGCATAATATCAATAGCAGGTGCATTTGTGTTGTCTTTCTACAAAGGCCCAGCAATCATCAATGCTCATACCCATCTTACCTCAGCACTTCATCAATCAATTCGCTTTCTTAGTTCAGAGGATGCAAGTTGGGCCATTGCTGGCATTCTGCTGACAGCTGACTATTTTCTAGTTTCACTATGGTATATTTTACAGGTGAATATCTTGAAAGAGTTCCCGGATGAACTAACTTTAGTCTTCATTTACAACGTGACTGCCACAATCCTATCTACAATTGTAGGTTTATTGACAGTGTCAGATGCAAGTGCTTGGAAAATAGGACTAGATATTTCACTGGTCTCCATTCTTTGCTCTGGAATATTTGGAAAGTTGATAAGCAATGTAGTTTTTGCCTGGGCACTGCGCTTAAAAGGGGCTGTCTATGTAACATCCTTCAAGCCAGTCCAAATTGTGATTGCTGTTGTCATGGGAGTTATTTTCCTTGGTGATACTCTTCATGTAGGAAGTATAATTGGAGCCACAATAATATCAATTGGCCTTTATGCTGTAATGTGGGGCAAAGTAACAGAAGAGGTAGAGGAAGATGTTGGTGGCCTGGAATCACCAACTACAGAGAATGCTCCTCTCTTGCAAAGCTACAGTACTGAAACTTTTGAAAAGAAAATAAATGGAAATGTTTAA 1107 0.4092 MARRWSFYRDLLPIVVIIGNECNDMGTLTLFKAATLQGMNNHVFVAYAYSVSTTVLLPLYFFTKRSRVVPPLSFPILSKMVLLGVIGSSSQILGYAGINYSSPTLASSIGNLVPAFTFLLAVTFRMEKLAAKSRSSQAKVVGSIISIAGAFVLSFYKGPAIINAHTHLTSALHQSIRFLSSEDASWAIAGILLTADYFLVSLWYILQVNILKEFPDELTLVFIYNVTATILSTIVGLLTVSDASAWKIGLDISLVSILCSGIFGKLISNVVFAWALRLKGAVYVTSFKPVQIVIAVVMGVIFLGDTLHVGSIIGATIISIGLYAVMWGKVTEEVEEDVGGLESPTTENAPLLQSYSTETFEKKINGNV. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00381 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 156 - -
Seca9g00381 368 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Seca9g00381 368 Pfam EamA-like transporter family 195 326 IPR000620 GO:0016020
Seca9g00381 368 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0016020|GO:0022857
Seca9g00381 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00381 Seca-Chr9 8364185 8368358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00381 1 358 Nodulin-like Gene Family AT3G28050 48.518 3.36e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00381 - - gmx:100790743 553.518