Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00370 ATGGCTGCTCGAATTCTTTCCTCTCTGCACTATGTCTCTTCTTCTGCTTCAGCTTCCAAACGTTGTTTTGGCCTATACTGTGGTTGGCATAGAAGAATCAGTGGAATTGGTGCTTCTGCTGCTGCTGATGTGGAGCCTAGCATACCACCTGTGCAAATTGATCACAATCAGCTTCTGATTAATGGAGAATTTGTGGATGCAGCTTCTGGAAAAACTTTTCCAACCTATGATCCTAGGACAGGAGATTTAATTGCCAATGTTGCTGAAGGTGACAGGGAAGATGTAAATCGTGCTGTCCATGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGCATAATTTTAAGGTTTGCTGATTTATTGGAAAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGCCTTATGAACAGGCTGCAAATGTTGAGATACCTATGGTTGTACGTGTGTTTCGGTATTATGCAGGTTGGGCGGATAAAATTCATGGTCTAACAGTCCCAGGTGATGGACCACACCATGTTCAAACCTTGCATGAGCCTATTGGTGTAGCAGGGCAGATTGTTCCTTGGAACTTCCCACTTCTTATTTATTCATGGAAGGTTGCACCTGCATTAGCATGTGGCAATACAGTTGTGTTGAAAACTGCAGAACAGACACCTCTTTCTGCCCTTTATGTGTCAAAGCTATTTCTTGAGGCAGGACTTCCTCCTGGTGTTCTAAATATTATCACTGGCTATGGTCCAACTGCTGGTGCAGCTCTGTGCAGTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCACTGGCACTGGTAAGATTGTACTAGGACTATCTGCACAAAGCAATCTGAAGCCAGTAACTCTGGAGTTGGGTGGAAAATCTCCTTTCATTGTGTGCAAGGATGCTGATGTTGATGTGGCTGTTGAGGCTGCACACTCTGCCTTATTCTTTAATCAGGGTCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGTATTTGTGGAAAAGGCTAAGGCCCGTGCCCTTAAACGTGTGGTTGGAGACCCTTTCAAAATTGGGGTTGAGCAAGGTCCTCAGTTGTATATGTTTCAGATTGATTCTACACAATTTGAGAAGATCCTGAAATACATAAGATCAGGCATTGAAGGTGGTGCTACACTTGAATCTGGTGGTCAAAGAGTTGGCTCCAAAGGCTACTACATCCAACCCACTGTTTTCTCAAATGTTCAGGACAACATGTTGATAGCAAAAGATGAGATCTTTGGTCCAGTACAATCTATCTTAAAATTCAAGGATCTAGAGGAGGTGATACAAAGGGCCAATGCAACTTCCTATGGCCTGGCTGCTGGAGTTTTTACTCAGAATATGGACACTGCTAACACCTTGATGCGTGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATGTCTTTGATGCAGCAATACCTTTTGGTGGATATAAGATGAGTGGGCAAGGGAGAGTAAGGGGAATCTACAGCCTTAGCAGCTATCTTCAAGTTAAAGCCGCTGTCACTGCTTTGAAGAATCCAGCATGGCTGTAG 1626 0.4373 MAARILSSLHYVSSSASASKRCFGLYCGWHRRISGIGASAAADVEPSIPPVQIDHNQLLINGEFVDAASGKTFPTYDPRTGDLIANVAEGDREDVNRAVHAARKAFDEGPWPKMTAYERSRIILRFADLLEKHNDEVAAIETWDSGKPYEQAANVEIPMVVRVFRYYAGWADKIHGLTVPGDGPHHVQTLHEPIGVAGQIVPWNFPLLIYSWKVAPALACGNTVVLKTAEQTPLSALYVSKLFLEAGLPPGVLNIITGYGPTAGAALCSHMDVDKLAFTGSTGTGKIVLGLSAQSNLKPVTLELGGKSPFIVCKDADVDVAVEAAHSALFFNQGQCCCAGSRTFVHESIYDVFVEKAKARALKRVVGDPFKIGVEQGPQLYMFQIDSTQFEKILKYIRSGIEGGATLESGGQRVGSKGYYIQPTVFSNVQDNMLIAKDEIFGPVQSILKFKDLEEVIQRANATSYGLAAGVFTQNMDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLSSYLQVKAAVTALKNPAWL. 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00370 541 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Seca9g00370 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 500 IPR016163 GO:0016620
Seca9g00370 541 SUPERFAMILY ALDH-like 53 533 IPR016161 GO:0016491
Seca9g00370 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 60 529 IPR016162 GO:0016491
Seca9g00370 541 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 44 530 - -
Seca9g00370 541 Pfam Aldehyde dehydrogenase family 64 530 IPR015590 GO:0016491
Seca9g00370 541 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
Seca9g00370 541 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 60 316 - -
Seca9g00370 541 CDD ALDH_F2BC 53 533 - -
Seca9g00370 541 FunFam Mitochondrial aldehyde dehydrogenase 2 308 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00370 Seca-Chr9 8160982 8165028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00370 1 541 Aldehyde Dehydrogenase Gene Family AT3G48000 72.894 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00370 K00128 - gmx:100798892 961.829