Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00367 ATGCATAAACTCCCAATGGCTTTTTGGAATTGGAACAGAAATGTGTTTCCAAAATCTATCTTGCTTGTTTGCATCTTCATTCTGATCACCACTATGAAGTTTGCAACTTCCTTGGCTCTAGAGGCAGGATGCAGCCTTAGAATTCATCTTTCACCCTTGTTGAATGATTCAAGTTGTGGAGCAGCATTTGATGCTTACCTCTATGCACTTGGTCATCGGGCAAATCAAACAGGGAAGGTTTTCTTGGATTCTACTGAGCAAAGAAATTGTCTGTTTATAAAGAGTTTTAAAGATAATACTATTTTTGGTTGTGGAATTGAGAACCTAACAAGTGGTGCTGGTGGATGTTCTGACTTCTTGGTTGCTGATGTTAGGAATAAATTAGGAAATGAACTTAGAAGTTTGGATGAAAACTGTAAACTTAACACTTCAGGTAACAAGTGGGAACAATCATGTCCTTCCTGCTTGAGAACCTGGAAAACCATAGGAGGGATAGATTCCAGAAAGACCAACATCCAAGCTGAAAAAACTGAAGCTGATCTTTGTAGAATTGCTGTACTTGTGACATTGATAAGCAGAAAAATTGAAAATGAGATATATGTCCACACAGTTCTGAGATGCCTGGGAAAACAACATATTTATGCAGCTGAAAATCAAACCACAGAAGGCAATCAGAAGATGAAGAGTGATAGAGATGATACTACAGGTATGTGGATTCTGATTGGAGCAATAGTAGGGGTTATTCTGTTAATAGTTATCACTGTATACATCATGCTTCGTAGATATTTCAGATCAGCCCCACCAAAAAACAAAGTAACATTTGGAGACATGTTAAAGAAAACTGCTTGTCCAATAGTTTCTATCAAGGAAGTGTATGCTGCCACTAACCATCTGAATGGAATGAATATCATTGGGGAAGGAACTGCAGGTGAGATTCTTTTTCCCTCTGTCTATAAAGGCACAATGAAAAATAAACAGGAGGTTGCAGTAAAGCACATAATCAATGATGATGGAAATATGGAAACTTTTGTCAGAGAAGTTACAAGCCTATCTCATGTCAGGCACCCAAATCTTGTTACTTTGCTGGGTTGCTGTGTTGAGGGAGATGAATGTTTTATTGTCTATGAGCTATGTCCCAATGGGAGTCTTTCTGAGTGGCTATTTGGGAAGAACAAGGTGTTGTCCTGGACACAGAGACTAGAAATTGCAATTGATAGTGCTCGAGGTCTTTGGTTTTTACACTCATATCCTGGAGGCTGCATCGTTCACCGTGATATCAAGCCAACAAATATTCTTCTTGGGTCTAAATTTGAGGCAAAGCTATCAGATTTTGGACTGTCTAAAGTTATTGAGGTGGGTGAAACGTATGTTAGTTCAGAAGTGAGAGGAACTTTTGGATATGTGGATCCTGAGTACCAAAGCAATCACCGTGTGAATTCATCAGGTGATGTTTACAGCTTTGGCATGGTACTTCTACAAATCCTCTCTGGAAAGAAGGTCATAAATTTGAAACTGAAGAAACCAATGTCACTGAGTAAAATGGCAAAAGCACTCACCAGGGATGGCAGCATTACAGAATTTGCTGATCCTAAACTTCAAGGAGATTACTCTGAGGAAGCATTTGATTTTACACTTAAGCTGGCTCTGTCATGCACATCACTCAACCAACATCGTCCGTCCATGGAGCAGGTTCTTAAAAAACTGGAAGAGGCCTTATTAATTTCAAAAGGGTGGAAGGTTTCTACTACAGAAACTCCAGAAGACAATGTTTGA 1773 0.392 MHKLPMAFWNWNRNVFPKSILLVCIFILITTMKFATSLALEAGCSLRIHLSPLLNDSSCGAAFDAYLYALGHRANQTGKVFLDSTEQRNCLFIKSFKDNTIFGCGIENLTSGAGGCSDFLVADVRNKLGNELRSLDENCKLNTSGNKWEQSCPSCLRTWKTIGGIDSRKTNIQAEKTEADLCRIAVLVTLISRKIENEIYVHTVLRCLGKQHIYAAENQTTEGNQKMKSDRDDTTGMWILIGAIVGVILLIVITVYIMLRRYFRSAPPKNKVTFGDMLKKTACPIVSIKEVYAATNHLNGMNIIGEGTAGEILFPSVYKGTMKNKQEVAVKHIINDDGNMETFVREVTSLSHVRHPNLVTLLGCCVEGDECFIVYELCPNGSLSEWLFGKNKVLSWTQRLEIAIDSARGLWFLHSYPGGCIVHRDIKPTNILLGSKFEAKLSDFGLSKVIEVGETYVSSEVRGTFGYVDPEYQSNHRVNSSGDVYSFGMVLLQILSGKKVINLKLKKPMSLSKMAKALTRDGSITEFADPKLQGDYSEEAFDFTLKLALSCTSLNQHRPSMEQVLKKLEEALLISKGWKVSTTETPEDNV. 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00367 590 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 126 570 - -
Seca9g00367 590 ProSiteProfiles Protein kinase domain profile. 298 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00367 590 FunFam probable receptor-like protein kinase At5g59700 378 586 - -
Seca9g00367 590 SUPERFAMILY Protein kinase-like (PK-like) 281 568 IPR011009 -
Seca9g00367 590 Gene3D Phosphorylase Kinase; domain 1 264 377 - -
Seca9g00367 590 Pfam SPARK 53 172 IPR043891 -
Seca9g00367 590 Gene3D Transferase(Phosphotransferase) domain 1 378 580 - -
Seca9g00367 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Seca9g00367 590 SMART serkin_6 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00367 590 Pfam Protein kinase domain 302 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00367 Seca-Chr9 8154705 8157976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00367 233 569 Receptor kinase-like Gene Family AT1G07650 37.931 1.05e-57 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Seca9g00367 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00367 - - aprc:113867593 881.708