Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00363 ATGGAAACTAATGGCATGGACGGTTCACGGGAGGAGAATGGATTTGAGGAAGAGGAGGCTGACCAATATAGGATTGACAATATTGCAGATTTGAATGGGGTTAATTTTATTGGTTTAACAAATGAGGAGGTAAAGCTCTACCACTTTTTGAATCGTAATGTGGAATTTCAATTCTACAATAAGTTTGCTCTTAAAAGGGAATTTGCGGCTCGTAGATGGAATGTTCTAAAAAATAAGAGAGGAGAGACTACTCAACAAGCTTTTATGTGTTTCAAGGAGGGTTTTCGTGACAAGAAATACTTAGAGAGGGAGGATAGAAAGCAGGAGCCTAGAGCAATGACAAGGTGTGGTTGTTTTGCCTTTTGTTGTGTGCGTTTAAATAAAGAGAGTGGTCGATGGAAGGTGAAATGTTTCAATGATGTCCATAATCATGAGTTGTTGTCTGAGGAGTATGTTGGAATGTTGTCTGCACATAGAAAGATGAATGAATGTGACATAATACAAATGGATAGCATGAGGGAAGATGGAATTGGTGTGACTCATATATATGGTTTAGCTGCAAATCAATGTGGGGGTTGCAACAATATTGGTTATAGGAAAAGAGATATGTATAATGAAATTGTAAGACAAAGGCGAATTGAAGTTAGTGATGCCAAATCTGCTTTTTCTTACCTTAGAACATTGTATTCCTCTGATCCGAAGATATTTTGGAGACACACTGTAGATACAGAAGATAGGCTTAAACACTTATTTTGGTGTGATATACGTAGCCAAGATGATTATAATGTTTTTGGCGATGTCGTTGCATTTGACGCAACATACCTTCGGAACAAATACATGTGTCCTTTTGTTGTTTTTGCAGGTGTTAACAATCATAACCAAACTATTGTATTTGGGTGTGGTTTAGTGGCAAATGAGACTGAGGAAACCTATGTTTGGTTGCTAAAACAATTTTTGGAAGCCATGAAAGGAAAGATTCCAATCTCCGTCATAATTGATGGTGATCTAGCAATGAAAAATGCAATAAGATATGTTTTTCCAACTGCACACCACAGACTATGTGCATGGTATTTGTTACGAAATGCAACGAGTAAGGTTAGCCATGCAAGTTTCATATCAAAGTTCAAAAGGTGCATGTTAGGCGACTATGAAGTGGGGACTTTTAGGCGTAAATGGGAAGGAATGGTTGCTGAATTTGGATTAGAGGGTAACCAGTGGGCTCAAGAAATGTATGAGAAACGAAAAATGTGGGCAACAACTCACATTCGTGGTCATTTTTTTGCTGGTTTTAGGACCACTTCTAGATGTGAAGGCCTTAATTCGCAAATAGGGAGATATGTGCATGTGAGAAATAATTTGACAGAGTTCTTGAAACAGTTCAATAGGTACATGGCCTACACTAGGCAAAGGGAACTAGAGGCAGATTTTGAGTCAATTATTGAGGATCCTGTGTTGGTCACACCATTGGAAGATCTAGAGGGTTTTGCAGCAAAGGTGTACACTAGGAAGTGCACTTGTCAAAGGATGGAGTCAATTGGACTTCCATGTGAACACATTGTTGCACTTTTGCATCACTTGGAAATAACCGAGTTTCCTGATTCACTTGTTCTACAAAGATGGACAAAGTATGCAAAACAATGTGTGGAAGGCAAAAGAGCGGACATGATAAATGCAACACGAGAAGTTGTTAGAAACCACTTGCAGGTGTTAAAGGAATCTGATGTTCCAGAAAGCGAACGAAATGGCAATGAAAGTGATGATAATGAGGATATCAGGGATCCTGTTCGAGTAAGAACAAAAGGTTGTGGATCGAGACAAATGTCAACAAATGGTAGAGGTAATCGAAGGGCTAACTGTTGCAGTGTTTGTCAACGACCAGGGCATAATAGGCAGACGTGTCCCCAACGAAGACATGAAGAAAATGCAGGTACCACCACTGAAGGAACATATGATGATGATAACACGGACATTCATATGATGGACACTGAAGACTGA 1995 0.3925 METNGMDGSREENGFEEEEADQYRIDNIADLNGVNFIGLTNEEVKLYHFLNRNVEFQFYNKFALKREFAARRWNVLKNKRGETTQQAFMCFKEGFRDKKYLEREDRKQEPRAMTRCGCFAFCCVRLNKESGRWKVKCFNDVHNHELLSEEYVGMLSAHRKMNECDIIQMDSMREDGIGVTHIYGLAANQCGGCNNIGYRKRDMYNEIVRQRRIEVSDAKSAFSYLRTLYSSDPKIFWRHTVDTEDRLKHLFWCDIRSQDDYNVFGDVVAFDATYLRNKYMCPFVVFAGVNNHNQTIVFGCGLVANETEETYVWLLKQFLEAMKGKIPISVIIDGDLAMKNAIRYVFPTAHHRLCAWYLLRNATSKVSHASFISKFKRCMLGDYEVGTFRRKWEGMVAEFGLEGNQWAQEMYEKRKMWATTHIRGHFFAGFRTTSRCEGLNSQIGRYVHVRNNLTEFLKQFNRYMAYTRQRELEADFESIIEDPVLVTPLEDLEGFAAKVYTRKCTCQRMESIGLPCEHIVALLHHLEITEFPDSLVLQRWTKYAKQCVEGKRADMINATREVVRNHLQVLKESDVPESERNGNESDDNEDIRDPVRVRTKGCGSRQMSTNGRGNRRANCCSVCQRPGHNRQTCPQRRHEENAGTTTEGTYDDDNTDIHMMDTED. 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00363 664 MobiDBLite consensus disorder prediction 602 617 - -
Seca9g00363 664 MobiDBLite consensus disorder prediction 567 664 - -
Seca9g00363 664 MobiDBLite consensus disorder prediction 632 664 - -
Seca9g00363 664 SMART 26again6 502 529 IPR006564 GO:0008270
Seca9g00363 664 ProSiteProfiles Zinc finger SWIM-type profile. 495 527 IPR007527 GO:0008270
Seca9g00363 664 Pfam FAR1 DNA-binding domain 57 147 IPR004330 -
Seca9g00363 664 Pfam MULE transposase domain 267 361 IPR018289 -
Seca9g00363 664 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 566 IPR031052 GO:0006355
Seca9g00363 664 MobiDBLite consensus disorder prediction 567 599 - -
Seca9g00363 664 Pfam SWIM zinc finger 499 526 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00363 Seca-Chr9 8122906 8126078 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g00363 MULE 3.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00363 - - tpra:123913749 612.068