Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00324 ATGTTGTATGGATATCTAATTCCGATATCACTCTATGTTTCCATAGAAATTGTGAAAGTTCTGCAGAGTATTTTTATCAACCAAGATCAGGAAATGTACTATGAAGAAACAGATTGGCCAGCACATGCACGCACATCTAATTTGAATGAGGAACTTGGTCAGGTTGATACAATACTGTTTGACAAAACCGGTACTTTGACATGTAACTCTATGGAGTTTGTCAAATGTTCCATAGGGGGCATTCCATATGGTCGTGGTATGACAGAAGTGGAGAAAGCACTTGCTAGATCTGATGTCTTGGGACAGAATAGTAATGCTGTGGACTCTAAAAAGCCAATTAAGGGCTTTAACTTTAGAGATGAACGCATAATGAGTGGGCAATGGGTTAATGAACCACATCCAGACATAATACAGAAATTCTTTCGAGTTTTAGCTATTTGTCATACAGCTATTCCAGAGAAGAACATGAAGAGTCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCATTTGTCATAG 528 0.3864 MLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEETDWPAHARTSNLNEELGQVDTILFDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARSDVLGQNSNAVDSKKPIKGFNFRDERIMSGQWVNEPHPDIIQKFFRVLAICHTAIPEKNMKSQEKFPMKLSHQMKQHLS. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00324 175 Gene3D - 69 114 IPR023299 GO:0000166
Seca9g00324 175 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 156 - -
Seca9g00324 175 Gene3D - 56 68 IPR023214 -
Seca9g00324 175 ProSitePatterns E1-E2 ATPases phosphorylation site. 61 67 IPR018303 -
Seca9g00324 175 SUPERFAMILY HAD-like 47 90 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00324 Seca-Chr9 7198856 7199422 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00324 1 160 Primary Pumps ATPases AT3G27870 73.054 1.10e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00324 K01530 - gmx:100779714 271.937