Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00323 ATGGCTGTGAAACCTACCAAGGCAGAGAAGAAGGTCGCTTACGATGCTAAGCTGTGCCAGCTCCTCGAGGAGTACACCCAGATCCTAGTGGTGAATGCCGACAATGTCGGATCCAACCAGCTCCAGAACATTCGTAAGGGTCTTCGTGGTGATTCCATTGTCCTCATGGGAAAGAACACCATGATGAAGCGTTCTGTTCGGATGCACGCTGAGAATACCGGCAACAACGTCTTTCTCAGCCTTATCCCCCTCCTTGTTGGAAATGTGGGTTTGATTTTCACTAAAGGTGACTTGAAGGAGGTTAGCGAGGAGGTTGCTAAGTACAAGGTCGGAGCTCCTGCTCGTGTGGGTTTGGTTGCACCAATTGATGTCGTTGTTCCTCCTGGCAACACAGGGCTCGACCCCTCTCAGACCTCTTTCTTCCAGGTGCTCAACATTCCAACCAAGATTAACAAGGGTACTGTGGAAATTATTACCCCTGTGGAACTCATTAAGAAGGGAGACAAGGTTGGCTCCTCAGAAGCTGCATTGCTTGCCAAGCTAGGCATAAGGCCCTTCTCATATGGACTTGTGGTCCTTTCTGTTTATGATAATGGTTCAGTGTTTAGCCCTGAGGTTCTTGATCTTACCGAGGATGACCTCATTGGGAAGTTTGCTATTGGTGTCTCAATGGTGACTTCTCTTTCATTGGCCATCTCATACCCAACACTCGCAGCTGCACCACATATGTTTGTCAATGGTTATAAGAACGTTCTTGCTGTTGCTGTTGAGACAGAGTATTCTTTCCCACAGGCAGACAAGGTCAAGGAGTACCTCAAGGACCCAAGTAAATTTGCTGTAGCTGCTGCTGCTGCTGCACCTGCTGCTGCTTCTGGTGCTGCCCCAGCTGCTGCCAAGGAAGAGGAAAAGAAGGAAGAGCCAGCTGAAGAATCTGATGATGATATGGGATTCTCTTTGTTTGACTAA 966 0.4845 MAVKPTKAEKKVAYDAKLCQLLEEYTQILVVNADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRMHAENTGNNVFLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAIGVSMVTSLSLAISYPTLAAAPHMFVNGYKNVLAVAVETEYSFPQADKVKEYLKDPSKFAVAAAAAAPAAASGAAPAAAKEEEKKEEPAEESDDDMGFSLFD. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00323 321 CDD Ribosomal_P0_L10e 9 185 - -
Seca9g00323 321 MobiDBLite consensus disorder prediction 293 321 - -
Seca9g00323 321 FunFam 60S acidic ribosomal protein P0 113 186 - -
Seca9g00323 321 Pfam 60s Acidic ribosomal protein 234 320 - -
Seca9g00323 321 PIRSF L10E 1 321 IPR030670 GO:0042254
Seca9g00323 321 Gene3D - 114 185 IPR043164 -
Seca9g00323 321 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Seca9g00323 321 Pfam Ribosomal protein L10 7 108 IPR001790 -
Seca9g00323 321 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Seca9g00323 321 Gene3D - 6 209 IPR043141 -
Seca9g00323 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 303 - -
Seca9g00323 321 MobiDBLite consensus disorder prediction 306 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00323 Seca-Chr9 7195710 7198274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00323 1 320 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 82.812 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00323 K02941 - jre:108991896 542.347