Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00297 ATGGCATCTAACCTTACTAATCAATCACGGAATGTTTTGAGCAAAAAACTAATGGCCAATGAAGAGGAAGCTTTGGACAATATCAATCTCTACTCAGTTATAACCATCATTTCCTTTATCCTATTGGTCCCATGTGCTATACTTATGGAGGGTGTCAAGTTTACTCCTTCATACTTGCAATATGCTGCAAGCCAAGGATTGAATGTTAGAGAGCTATGTGTAAGATCAGTTTTGGCTGCTTTCTGCTTCCATGCATACCAACAGGTTTCTTATGGAATATTAGGGATGGTATCACCAGTGACCCACTCAGTTGGAAATTGTGTGAAGCGTGTGGTCGTCATAGTCTCTTCAGTTATCTTCTTCCAAACTCCTGTCTCACGCATTAACGCACTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGCAAAACGGATTAAGCCAATGCCAAAGACAAAGGCAGCATAA 477 0.4067 MASNLTNQSRNVLSKKLMANEEEALDNINLYSVITIISFILLVPCAILMEGVKFTPSYLQYAASQGLNVRELCVRSVLAAFCFHAYQQVSYGILGMVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSRINALGTAIALVGVFLYSRAKRIKPMPKTKAA. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00297 158 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 148 - -
Seca9g00297 158 PANTHER SOLUTE CARRIER FAMILY 35 1 148 - -
Seca9g00297 158 Pfam Triose-phosphate Transporter family 1 144 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00297 Seca-Chr9 6678068 6680162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00297 1 154 Antiporters AT3G01550 71.795 3.29e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00297 K15283 - gmx:100819280 255.373