Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00268 ATGAATACGACGCCGTTCATGGACAAGCAGATAATGGATCTCACTCATGGATCTTCTCCGACGCAGAGCAACAAGGACTTCATCGACCTCATGAAACCCAAACACCAAGACGAAGAACCACAGCATCAACATCATCGAACTGAAGAAGAAGAAGAAGAAGGGCGTGGCAATGGGATCAAAACCGACGATATCGTTCCCAGCTACGATTTCCAACCGATTCGCCCACTCCCCGCTTCCAATTACGATCCTGCCCCCAATTTCGTTTCCGCATTTTCCAGGCCTTGGAACTCTGATTCCAACTCCAACTCTTACCAAAAATTTGCACAGAATTACAGTTCGCTGGATTCTATTGAACCTGTGAAGGTCAATGTAGAAAAGGACCAAAATGCTTTTGATACTACATTTTTGTCTGAGATTGATCGAACTATGAAGAAACATATGGAAAATTTGCTTCATGTTGTGGAAGGTGTTAGTGCACGGTTAACACAACTAGAAACCAGAACATACCATCTTGAGAATTCAATGGATGATTTAAAGTTATCTGTTGGAAATAATCATGGTAACACTGATGGAAAATTGAGACAGATGGAAAATATTCTTCGAGAGGTGCAAACGGGGGTGCAAACTATCAAGGATAAGCAAGATATAGTGCAAGCTCAGCTGCAACTGGCAAAGCTACAAGTATCCACCAAGACAGATCAACAATCTGAAACTCAAACTAGTGTAGTTACAGATCCTGGGCAGCAAGCTGCATCTGCTCCCCTTCAATCTCAACAACAGCTTCCTTCCCCTGTTAATCTTCCGCAATCAATTCCTGTGGTTCCTCCCCCTAATGCGCCTCCTCAACCTGCCCCCCAACAAGTTTTGCCATCTGCAGTTCAACTTCCAAATCAATTCCCCCAGATCCCAACCCCAGCTGTTCCTCAGAGAGATCCATACTTCCCACCACCCATTCAATCTCAGGAAACTCCAAATCAGCAATACAAACTTCCTTTAGCTCAGCAGCCACATCCTCAACCTGGCGCACCTCCGCATCAACAATATCAACAAACCCCTCATCCCCAGTACTCTCAGCCAGCACCTCATCCTCCTCAACAGCAGCCATCGATTTCACCTGGAAGTCTGCCTCAACTACAATCTTCACTAGGTCACCATGTAGAGGAACCACCTTATGCTCCTTCTCAGAATTATCCTCCTCCCAATCTACGCCAACCCCCATCTCAGCCACCCAGCGGACCTCCTCCTCCTTCTCAACAATTCTATGGGACACCACCCCATGCATATGAGCCTCAGCCACCATCGAGTAGATCTGGTCCGGGTTATTCTTCTGGATATGGTACATTATCTGGGCCTGCTGAGCCATATAGATATGGTGGTTCAACTCAATATGGTGGTAAACCACCACAACTACCCACTGCTTCAGTGGCTCCAAGTGGTGGGAGTGGTTACCCACAGCTCCCAACTGCTCGGGTGCTCCCCCAAGCAATTCCCACTGCATCTGCAGTAAGTGGTGGCTCAGGTTCTCCTGGAACTGGAAACCGGGTTTCTATTGATGATGTAGTTGACAAAGTTGCTAGTATGGGATTCCCTAGAGATCATGTGAGGGCAACAGTTCGGAAGCTGACAGAGAATGGTCAATCAGTTGACCTAAATGCAGTGCTGGATGAGCTTATGAATGAAGGTGAAATCCAACCACCAAGAGGTTGGTTTGGCCGGTAG 1719 0.4695 MNTTPFMDKQIMDLTHGSSPTQSNKDFIDLMKPKHQDEEPQHQHHRTEEEEEEGRGNGIKTDDIVPSYDFQPIRPLPASNYDPAPNFVSAFSRPWNSDSNSNSYQKFAQNYSSLDSIEPVKVNVEKDQNAFDTTFLSEIDRTMKKHMENLLHVVEGVSARLTQLETRTYHLENSMDDLKLSVGNNHGNTDGKLRQMENILREVQTGVQTIKDKQDIVQAQLQLAKLQVSTKTDQQSETQTSVVTDPGQQAASAPLQSQQQLPSPVNLPQSIPVVPPPNAPPQPAPQQVLPSAVQLPNQFPQIPTPAVPQRDPYFPPPIQSQETPNQQYKLPLAQQPHPQPGAPPHQQYQQTPHPQYSQPAPHPPQQQPSISPGSLPQLQSSLGHHVEEPPYAPSQNYPPPNLRQPPSQPPSGPPPPSQQFYGTPPHAYEPQPPSSRSGPGYSSGYGTLSGPAEPYRYGGSTQYGGKPPQLPTASVAPSGGSGYPQLPTARVLPQAIPTASAVSGGSGSPGTGNRVSIDDVVDKVASMGFPRDHVRATVRKLTENGQSVDLNAVLDELMNEGEIQPPRGWFGR. 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00268 572 MobiDBLite consensus disorder prediction 229 487 - -
Seca9g00268 572 PRINTS Proline rich extensin signature 389 414 - -
Seca9g00268 572 PRINTS Proline rich extensin signature 269 285 - -
Seca9g00268 572 PRINTS Proline rich extensin signature 331 352 - -
Seca9g00268 572 PRINTS Proline rich extensin signature 305 317 - -
Seca9g00268 572 PRINTS Proline rich extensin signature 357 373 - -
Seca9g00268 572 MobiDBLite consensus disorder prediction 1 26 - -
Seca9g00268 572 MobiDBLite consensus disorder prediction 392 432 - -
Seca9g00268 572 MobiDBLite consensus disorder prediction 229 267 - -
Seca9g00268 572 MobiDBLite consensus disorder prediction 268 287 - -
Seca9g00268 572 MobiDBLite consensus disorder prediction 1 64 - -
Seca9g00268 572 Pfam UBA-like domain (DUF1421) 517 560 IPR010820 -
Seca9g00268 572 MobiDBLite consensus disorder prediction 28 59 - -
Seca9g00268 572 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 571 - -
Seca9g00268 572 MobiDBLite consensus disorder prediction 356 370 - -
Seca9g00268 572 MobiDBLite consensus disorder prediction 301 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00268 Seca-Chr9 6294517 6299867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00268 1 314 Trihelix Transcription Factor Family AT5G14540 44.688 1.30e-63 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00268 - - gmx:100777464 690.263