Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00258 ATGGCCATTCTAGTTCTAACAACAATTGTAGCGTTCTTTTGCTTCCTATACATCTTTCATAGGAGACTATGTTGTAGATACCCCCTTTTGATAGACTTTCCTATCCTTGGCATGTTACCACTAGTCCTTTGGAACTTGTGGCGTATCCATGATTTCATTACTGATGTATTGAAACAACATAAGGGCACAGGGGAATTCATGGGACCATGGTTTACCAAAATGAACTACATGGTCACTAGTGACCCCATCAATGTGCACCATATTCTGAGCAAGAGTTTTGACAACTATGTGAAGGGTCCTGTTTTTCGTGAGATTTTTCAACCTTTCGGAGATGGGATAGCCACTGTTGATTCAGACGAATGGAAATACATTAGGTCTCTCCTAATTTCTCTGATTAAACAGAGAAGCTTTGATCTTCTTCAAGAGAAGATCATTCAGAAGAAGATGCAGAGATGCTTAGTTCCTCTATTGGATCATGTACAACAACAAGGGACAGTGGTGGATCTACAAGATGTCTTAAATCGATTCACATTTGATAACATATCCTCCATTGTTCTAGGATGTGATCCTAATTGTCTTTCCATTGATTTCCCTGAAGTTGCTTTTGAGAAGGCTTTTAATGAAGCAGAGGAATCCATATTCTATAGACACACAGTGCCAATGTGTGTTTGGAAGTTGCAAAAGTGGCTTCAAATTGGTCAAGAGAAGAAAATGACCAAAGCATGCAAAACATTTGATGAATTCATCTATTCATGTATAGAGTCTAAGAGAAAAGAGGTAAACAAAAATGAAAAGGTTGAAGTTCATGTTGACCTTCTAACAGCTTTGATGAGAGCAGAAAAAGGAAGAGTACATAATGACAAGTTTCTAAGGGATGCTGCATTTAACCTTTTTGTAGCAGGGAGAGAAACCATAACTTCAGCTCTTACATGGTTCTTCTGGCTTGTTGTTACAAACCCATCAGTGGAAGCTAAGATTCTTGAAGAGATCAAAGATAATTTTGGCATAGAGGAGGTGAAAAGGCTAGTTTATCTTCATGGTGCTATATGTGAAGCTTTAAGACTTTTCCCTCCTGTACCTGTTGAGCGTAAGCAAGCAATTAAAGCTGATATACTTCCAAGTGGTCACCATATCAATCCCAATACAATGATACTATTTTCTTCATATGCAATGGGGAGATTTGAAGAAATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAAAGATGGATCTCTAACAGAGGAGGCACTATTTATGTACCATCTTATAAGTTCATAAGTTTTAATGCAGGACCAAGGACTTGTTTGGGAAAGGACTTGGCCTTCATTCAAATGAAGATGGTGGCAGCTGCTATTTTGTGTGACTATCATGTTCAACTTGTGGAAGGTCTTGTTGCTACCCCAAGCCATTCAGTTATACTTTATATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA 1470 0.381 MAILVLTTIVAFFCFLYIFHRRLCCRYPLLIDFPILGMLPLVLWNLWRIHDFITDVLKQHKGTGEFMGPWFTKMNYMVTSDPINVHHILSKSFDNYVKGPVFREIFQPFGDGIATVDSDEWKYIRSLLISLIKQRSFDLLQEKIIQKKMQRCLVPLLDHVQQQGTVVDLQDVLNRFTFDNISSIVLGCDPNCLSIDFPEVAFEKAFNEAEESIFYRHTVPMCVWKLQKWLQIGQEKKMTKACKTFDEFIYSCIESKRKEVNKNEKVEVHVDLLTALMRAEKGRVHNDKFLRDAAFNLFVAGRETITSALTWFFWLVVTNPSVEAKILEEIKDNFGIEEVKRLVYLHGAICEALRLFPPVPVERKQAIKADILPSGHHINPNTMILFSSYAMGRFEEIWGKDCLEFKPERWISNRGGTIYVPSYKFISFNAGPRTCLGKDLAFIQMKMVAAAILCDYHVQLVEGLVATPSHSVILYMKNGLKVRITKREI. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00258 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Seca9g00258 489 PANTHER CYTOCHROME P450 22 482 - -
Seca9g00258 489 Gene3D Cytochrome P450 25 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 CDD CYP86A 65 480 - -
Seca9g00258 489 Pfam Cytochrome P450 40 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00258 489 SUPERFAMILY Cytochrome P450 17 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00258 Seca-Chr9 5998334 5999836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00258 10 487 Cytochrome P450 AT4G39490 45.793 5.71e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00258 - - gmx:100780625 730.709