Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00251 ATGGTTGGTTATGCAGCAATAATTGCAGCACTTTTCTTCTTCCTATACATCTTCCATCAAAGAAGATGTAGATACCCTCTCTTAATAGACTTTCCTATCCTTGGCATGTTACCACAACTCCTTTGGAACTGGTTGCAGATTCATGATTTCATAACTAAGGTGCTGAAACAACAAGGAGGCACTGGAGAGTTCATGGGACCTTGGTTTACCAAAATGAACTATATGGTAACCAGTGATCCTAAGAACGTGCACCACATGATGAGTAAGAGCTTTGACAATTATGTGAAAGGTGATGAGTTTCGTGAGATCTTTCAAGCTTTTGGTGATGGAATATTCACTGCTGATTCAGAAGAATGGAAATACAACAGGTCTCTGTTTCATTCTCTGTTTAAACAGAGAAGCTTTGAGGTGCTTCAAGAGAAAATCATTCAGAAAAAGATGCAAAAAAGCTTGCTTCCTATATTGGATCATGTACAACAACAAGGGATAGTGGTTGATCTACAAGATGTCTTCAATAGATTCACATTTGATAACATATGTTCTATTGTTTTAGGATATGATCCTAATTGCCTTTCCATTGATTTCCCTGAAGTTGCATGTGAAAAGGCTTTTAATGAAATAGAAGAATGCATATTCTATAGACATGCCATGCCAAAAATTGTTTGGAAGTTGCAAAAAAGGCTTCAAATTGGCCAAGAGAAGAAGATGAGTGAAGCTTGTAGAACATTGGATCAGTTCATATATGAATGTATAGAGTCTAAGCAAGAAGAGCTAAGAAGAAATCATGAAATGGCTGAAGCTGATCATGATCACACTGATTTGCTAACAGCTTTGATGAAAGAAGAGAATATTCATGACAAGAAGTTTCTTAGAGATGCTGCATTTAATCTTTTTGTGGCAGGGAGAGATACTATTACTTCAGCTCTTACATGGTTCTTTTGGCTTGTTGCTACAAACCCTTTAGTGGAAGCCAAGATTCTTGAAGAGATTAAAGATAATTTAGGGGTGGAGGAGGTGAAAAAGCTAGTTTATCTACATGGTGCTATATGTGAGGCTTTGAGGCTTTTCCCTCCAATACCTTTTGAGCACAAGCAAGCAATCAAAGCTGATGTACTTCCTAGTGGTCACCATATTGATCCCAAAACAACGATATTATTCTCTTTGTATTCAATTGGGAGATTTGAAGAAATATGGGGGAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATCTCTGAGAGAGGAAGCATTGTTCATGTACCATCTTACAAATTCATTAGTTTTAATGCAGGACCAAGGACTTGTTTGGGAAAGGACTTGGCCTTCATTCAAATGAAGATGATAGCAACTGCTATTTTGCAGAACTATTGTATCCAACCTGTGGAAGATCATGTTGCTACCCCAAGCTTTTCAATTGTACTTCTTATGATGCATGGTTTGAAGGTTAGGATAACAAAAAGACAAGTTTGA 1470 0.3741 MVGYAAIIAALFFFLYIFHQRRCRYPLLIDFPILGMLPQLLWNWLQIHDFITKVLKQQGGTGEFMGPWFTKMNYMVTSDPKNVHHMMSKSFDNYVKGDEFREIFQAFGDGIFTADSEEWKYNRSLFHSLFKQRSFEVLQEKIIQKKMQKSLLPILDHVQQQGIVVDLQDVFNRFTFDNICSIVLGYDPNCLSIDFPEVACEKAFNEIEECIFYRHAMPKIVWKLQKRLQIGQEKKMSEACRTLDQFIYECIESKQEELRRNHEMAEADHDHTDLLTALMKEENIHDKKFLRDAAFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEIKDNLGVEEVKKLVYLHGAICEALRLFPPIPFEHKQAIKADVLPSGHHIDPKTTILFSLYSIGRFEEIWGKDCLEFKPERWISERGSIVHVPSYKFISFNAGPRTCLGKDLAFIQMKMIATAILQNYCIQPVEDHVATPSFSIVLLMMHGLKVRITKRQV. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00251 489 Coils Coil 248 268 - -
Seca9g00251 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Seca9g00251 489 Gene3D Cytochrome P450 24 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 CDD CYP86A 63 480 - -
Seca9g00251 489 Pfam Cytochrome P450 31 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PANTHER CYTOCHROME P450 23 481 - -
Seca9g00251 489 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00251 489 SUPERFAMILY Cytochrome P450 31 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00251 Seca-Chr9 5841235 5842704 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00251 8 488 Cytochrome P450 AT2G23180 46.931 1.19e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00251 - - gmx:100779590 732.635