LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g00250	ATGGGGCCTTTGATTGAAGAGCAAAGGCTGAGATGTTATTCCAGTCATTGCAAAGTATTTCTGGACTCCTCTCTAATGTTAGTATTTCCGGACTCCGCTACCATTGTGAGTGAACAAGAAGCTTTGCAAAATAACAACTCAAAAAGAGGTTTGGATGTTGTGAATAATATCAAGACAGCTGTGGAAAAAGCTTGTCCTGGCATAGTTTCCTGTGCTGATATTCTTGCCCTTGCTGCTGTGGTATCTTCTGCTCTGGTGACTGCTTGGTGCAGAGGGTGTGCCCATTATGTGAGTTCCCCAATTCTCAATGGCAGGGGATGA	321	0.4424	MGPLIEEQRLRCYSSHCKVFLDSSLMLVFPDSATIVSEQEALQNNNSKRGLDVVNNIKTAVEKACPGIVSCADILALAAVVSSALVTAWCRGCAHYVSSPILNGRG.	107

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g00250	106	PANTHER	PEROXIDASE 72-RELATED	22	85	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Seca9g00250	106	SUPERFAMILY	Heme-dependent peroxidases	30	86	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Seca9g00250	106	Pfam	Peroxidase	35	86	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca9g00250	106	Gene3D	-	5	97	-	-
	Seca9g00250	106	PRINTS	Plant peroxidase signature	68	78	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Seca9g00250	106	PRINTS	Plant peroxidase signature	49	62	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Seca9g00250	106	ProSiteProfiles	Plant heme peroxidase family profile.	1	106	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g00250	Seca-Chr9	5815611	5817704	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca9g00250	12	79	Peroxidase	AT5G05340	52.941	5.76e-17	72.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g00250	K00430		-	gmx:100804765	82.4185