Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00249 ATGCTTGGCTACACAGCAATTGTTGTAGTAGTAGTAGTACTCCTCACCTTCTTTTATCTTTTCCATCGCAGCAAAAACCCTGCCTTAATAAACTGGCCTTTTCTTGGTATGTTACCACAAGCCCTCTTGAACTTGTGGCGCATCTATGATTTCATAACTGATGACTTGAAATCACAAGGTGGCACTTCAGAGTTCAAAGGACCTTGGTTTACCAACATGGATTGTATAGTCACAGGTGATCCAATGAATGTGCATCACATAATGAGCAAGAGTTTTGACAACTACGTCAAAGGTGATGAGTTTCGTGAGATTTTTCAAGCTTTTGGTGATGGGATATTCACTGCTGATTCAGAAACATGGAAATACAACAGGACTCTGTTCCATTCTCTGTTTAAACAGAGAAGCTTTGAGGTGCTTCAAGAGAAAATCATTCAGAAAAAGGTGCAAAGAACCTTACTTCCTATGTTGGATCATGTACAACAACAAGGGTCAGTGGTTGATCTACAAGATGTCTTCAATAGATTCACATTTGATAACATTTGTTCCCTTGTTTTAGGATATGATCCTAATTGCCTTTCTATTCACTTCCCTGAAGTTGCATGTGAGAAGGCTTTTAACCAAGCAGAAGAATGCATCTTCTATAGACACACAGTGCCAATGTGTGTATGGAAGTTTCAAAAATGGCTTCAAATTGGTCAAGAGAAGAAAATGACTGAAGCATGCAAGGTATTTGACCAGTTTCTATATGCATGTATAGCATCCAAGCGTGAAGAGCTAAGCAAGTATAGCAGAAATCAAATGGGTGCTGAGACTCAAGATGATTTGCTAACAGCTTTGATGAGATCAGAAGAAAAAGGACAAGTACATGATGACAAGTTTCTAAGAGATGCAGCATTCAATCTTTTTGTAGCAGGGAGAGATACTATTACTTCAGCACTCACATGGTTCTTTTGGCTTGTTGCTACAAACCCATTAGTGGAATCCAAGATTCTTGAAGAGATCAAAGAGAATTTTGGGGCCAAAGAAAAAAAGTATGGCCTTTTATTAGGCATGGAGGAGGTGAAAAAGCTAGTTTATTTGCATGGTGCTATATGTGAAGCTTTGAGGCTTTTTCCTCCAATACCTTTTGAGAGGAAGCAAGCAATTAAAGCTGATACACTTCCTAGTGGTCACCATATTGATCCCAAAACAATGATATTATTCTCTTTGTATTCAATGGGGAGATTTGAAGATCTATGGGGGAAAGATTATTTGGAGTTTAAGCCAGAGAGATGGATTTCTGAGAGAGGAAGCATTGTTCATGCACCATCTTACAAGTTCATTAGTTTCAATGCAGGACCAAGGGCTTGCTTGGGAAAGGACTTGTCCTTCATTCAAATGAAGATGGTGGCAACTGCTATTTTGTGCAACTATAGTATCCAAGTGGTGGAAGGTCACTGTGCCACCCCAAGGCATTCTATTGTACTTCTCATGAAGCATGGTCTCAAGGTTAGGATTACAAAAAGGGGAATTTGA 1515 0.3927 MLGYTAIVVVVVVLLTFFYLFHRSKNPALINWPFLGMLPQALLNLWRIYDFITDDLKSQGGTSEFKGPWFTNMDCIVTGDPMNVHHIMSKSFDNYVKGDEFREIFQAFGDGIFTADSETWKYNRTLFHSLFKQRSFEVLQEKIIQKKVQRTLLPMLDHVQQQGSVVDLQDVFNRFTFDNICSLVLGYDPNCLSIHFPEVACEKAFNQAEECIFYRHTVPMCVWKFQKWLQIGQEKKMTEACKVFDQFLYACIASKREELSKYSRNQMGAETQDDLLTALMRSEEKGQVHDDKFLRDAAFNLFVAGRDTITSALTWFFWLVATNPLVESKILEEIKENFGAKEKKYGLLLGMEEVKKLVYLHGAICEALRLFPPIPFERKQAIKADTLPSGHHIDPKTMILFSLYSMGRFEDLWGKDYLEFKPERWISERGSIVHAPSYKFISFNAGPRACLGKDLSFIQMKMVATAILCNYSIQVVEGHCATPRHSIVLLMKHGLKVRITKRGI. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00249 504 CDD CYP86A 64 495 - -
Seca9g00249 504 PANTHER CYTOCHROME P450 20 497 - -
Seca9g00249 504 SUPERFAMILY Cytochrome P450 18 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 Gene3D Cytochrome P450 16 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 Pfam Cytochrome P450 31 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Seca9g00249 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g00249 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00249 Seca-Chr9 5799134 5800648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00249 8 503 Cytochrome P450 AT2G23180 47.638 8.01e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00249 - - gmx:100779590 755.362