Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00232 ATGGTTTTTGTTTCTAAAATTGTTTTATCTCTCGGTATGTTGGTAATGGTAACTATACTAGTTGCTTTGCAGTTCAATGGTGGTAATGCAGGGGTAGTATTATTTGAAAGAACTGTTGCAATATCCAACAAGTTAAATGGTTATCAGTTGGGTGTTCATTGCAAAGACAAGAATCATGATCTTGGCTTTCATGTTCTGCCCGTCGGAGGAAGCTACAGATTCAAATTTGTTGTTAATCCTTTAATTCGTAATACATTGTACTTTTGCTTCTTTAATTGGACTGACGGAGGATACTACTTTAACATCTATGTCCAAGCTCGAGATCCTTGTTCTTATTGTTATTGGGAAATCGTGGCATCAGGACCATGTATAGTTTGGAGGGATAATCGGCAATGCTATTATTGGAATCAACCGACAAAGATAGCTTGA 429 0.3683 MVFVSKIVLSLGMLVMVTILVALQFNGGNAGVVLFERTVAISNKLNGYQLGVHCKDKNHDLGFHVLPVGGSYRFKFVVNPLIRNTLYFCFFNWTDGGYYFNIYVQARDPCSYCYWEIVASGPCIVWRDNRQCYYWNQPTKIA. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00232 142 Pfam Plant self-incompatibility protein S1 38 135 IPR010264 -
Seca9g00232 142 PANTHER - 36 125 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00232 Seca-Chr9 5353625 5354053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00232 38 137 Carbohydrate Esterase AT3G16970 37.273 2.56e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00232 - - cam:101507265 120.553