Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00229 ATGGTTTTTCTTTCGAAAATTGTTTTATCTCTCTATATGTTGGTAATGGTAACTATACTGGTTGCTTTGCAGTTCAATGGTGGTAACGCAGGAATAATACCTAAAAGAACGGTTGCAATAGCCAACAAGTTAAATGATTCTCAGTTGGGTGTTCATTGCAAAGACAAGCATCATGATCTTGGCTTTCAAGTTTTGCCCGTCGGAGGGAGCTACAGCTTCCGATTTATTGTTGATCCTTTCATTCGTAATACATTATACTTTTGCTTCTTTAGTTGGACTACCGGAGGTTACTACTTCAACATCTATGTCCAAACTCGAGATCATTGCTCTTATTGTTATTGGGAAACCGTGGAATCAGGACCATGTCTGGTTTGGAAGGATAATCGACAATGCTATTATTGGAATCAACCCACAAAGATAGCTTGA 426 0.385 MVFLSKIVLSLYMLVMVTILVALQFNGGNAGIIPKRTVAIANKLNDSQLGVHCKDKHHDLGFQVLPVGGSYSFRFIVDPFIRNTLYFCFFSWTTGGYYFNIYVQTRDHCSYCYWETVESGPCLVWKDNRQCYYWNQPTKIA. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00229 141 PANTHER - 33 125 IPR010264 -
Seca9g00229 141 Pfam Plant self-incompatibility protein S1 37 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00229 Seca-Chr9 5238561 5238986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00229 34 136 Carbohydrate Esterase AT3G16970 37.168 1.52e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00229 - - pvu:PHAVU_004G003100g 122.094