Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00228 ATGGTTTTTGTTTTGAAAATTGTTTTATCTCTCTGTATATTTGTAATGGTAACCATGCTAGTTGCTTTGCAGTTCAATGGTGGTAACGCAGGGATAATACCTGAAATAACTGTTGTAATGGCCAACAAGTTAAATGGTTATCAGTTGGGTGTTCATTGCAAAGACAAGCATAATGATCTTGGCTTTCATGTTCTGCCCGTCGGAGGAAGATATGGCTTCAAATTTCCTATTAATCCTTTCTTTCGTAATATATTGTACTTTTGCTTCTTTAGTTGGACTACCGAACGACACTACTTTAACATCTATGTCCAAACTCGGGATCGTTGTGATTATTGTTATTGGGAAATTGTGGCATCAGGACCATGTTTGGTTTATAAGGATAATCGAAAATGTTATTATTGGAATCAACCCACAAAGATAGAAGGGAACTAA 432 0.3588 MVFVLKIVLSLCIFVMVTMLVALQFNGGNAGIIPEITVVMANKLNGYQLGVHCKDKHNDLGFHVLPVGGRYGFKFPINPFFRNILYFCFFSWTTERHYFNIYVQTRDRCDYCYWEIVASGPCLVYKDNRKCYYWNQPTKIEGN. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00228 143 Pfam Plant self-incompatibility protein S1 37 134 IPR010264 -
Seca9g00228 143 PANTHER - 36 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00228 Seca-Chr9 5151492 5151923 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00228 34 138 Carbohydrate Esterase AT3G16970 39.130 1.45e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00228 - - lang:109347126 121.324