Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00227 ATGGTTTTTGTTTCGAAAATTGTTTTCTCTTTATGTATGTTGGTAACTATACTTGTTTCTTTGCAGTTCTACAGTGGCAATGCAACTGGGATACTACCTCACAAAGTGACTGTTGAAATAATCAACACGTTAAGTAATAATATGGAGTTGGGTGTTCATTGCAAAGACAAGCATAATGATCTTGGGTTTCATGTTCTACCCGCTGGAGCAAGCTACAGCTTCAAATTTTTGCCCAATGTCTTCGTAGACGTTACGTTGTACTTTTGTAAATTTACTTGGAAAACAGGAGAACACTACTTTGATATCTATGTTCAAGAACGAGATGATTGTGATAAAGTATGTTATTGGGAAATATTGGAAACAGGACCATGTGAGGCTAAGCCAGTGTCTCGAGAATGCTTTCAGTGGAACGATGCGATAAAGGCGATTTGGTGA 435 0.377 MVFVSKIVFSLCMLVTILVSLQFYSGNATGILPHKVTVEIINTLSNNMELGVHCKDKHNDLGFHVLPAGASYSFKFLPNVFVDVTLYFCKFTWKTGEHYFDIYVQERDDCDKVCYWEILETGPCEAKPVSRECFQWNDAIKAIW. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00227 144 Pfam Plant self-incompatibility protein S1 37 136 IPR010264 -
Seca9g00227 144 PANTHER - 33 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00227 Seca-Chr9 5117109 5117543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00227 11 137 Carbohydrate Esterase AT3G16970 35.507 8.86e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00227 - - pvu:PHAVU_004G003100g 149.058