Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00214 ATGGAGGCTCAACCCACCGGCAACAAGCTCCGGCTGATGTGCAGCTACGGCGGCCACATACTCCCTCGTCCACGAACCAACTCTCTCTGCTACGTCGGCGGCGAAACCCGCATCGTTTCAATGGACCGCCGCACCGTCACCACTCTTTCCTCTTTGGTTTCCCACCTCTCCTCTGTTCTCTCTCTCACCTTCCCTTTCTCTCTCAAGTACCAGCTTCCCAACATCGACCTTGACTCCCTCATCTCCCTTTCCTCCGATGACGATTTCCACATCCTCATCGATGAGCATAACCGTCTTTCTTCTTCTTCCTCTCGCATTAGGCTCTTTCTCTTCCCTCTCATTCGCCACCCCAAAACAGAGTCTTGGTTCGTCGATGCCCTCAAGAATGCTAACATTGTTATGCAACAGCAGCAGCATCATCCTCACTCTGAACACTCTCACCACTTTCTCTCTTCTGCTACTCCCCCTGTTGACTCCGTGCATTTGGACTCGAGTTCGTCTTTTGGGTCTGCTTCGTCTTCTGCTTCCTTCACCAATTTGCCTCCCATAAGACCTCAGTGTGACGACAACGACGCCGTTTTCAAGTTTACCACTTCAGATACAATTGCGAGTGATAATACTGTTTCAAGTATTATGTCCAGCCAGCAGAATGTATCTTACCAAGACCCTGCTGTTCATGTTTCTGAGGCAAGACTCAATGCAGAATCCATTGAAGTTGAAAGTAAAATCCCTTATATTTCCTCTGGGGTCATAGCCAATAACACAAATATGGATAAAGGGTATTATTCATTTCCACAGTTTAATCAAGTGGAGAGGCCACATTTGCAGTATGTGCCAGCTGCAACACAATTTTTACCTCTTCACCCAAGTTCCATGTTGCCAGTACAAACTTGCCAGGTTATTTACCAGCCACCACGTTCTTTGCAGCATCTGGTTTATCATCCTAATCAACCATGCCCTGTCTACCTTGTGCCTATTGGAAACACGCCTCCCAATAGTTTGCCTATAAATGCCACTAGCCAAGCTTCATTGAATCTAAATGCTTCCTTTATGAATTATCATGTAGCTCAAGACCCTGAAGTGGGAGCCATGTCTTCTTTTGCTCATGGTTCTCTTACCTCTCAGAATTACTTAATAGACAATGCAACTACATCTTTTATTTATGTACCTTGCAATGGAAGTCAGCAGCCAGAAATGGATTTTTATCAGCAATCTCAGAACATACCTGTCACTTCCAGGGAGTCCCCCAACCCCAAGTATGGAAATGAACTTGATGATGACTTTACACATGCTCAGATATATAAATCTCAGCCCCCACCTCCAACAATGTCTTCTAAATACCAAACCATGACAAAAGAAACAACAAACCTGATATCAGAGGCTCTTGCTCAATTGCATGTGGATAACCTCAAGCAGCAGACAGAAACATCACAACCACAGTGA 1443 0.4553 MEAQPTGNKLRLMCSYGGHILPRPRTNSLCYVGGETRIVSMDRRTVTTLSSLVSHLSSVLSLTFPFSLKYQLPNIDLDSLISLSSDDDFHILIDEHNRLSSSSSRIRLFLFPLIRHPKTESWFVDALKNANIVMQQQQHHPHSEHSHHFLSSATPPVDSVHLDSSSSFGSASSSASFTNLPPIRPQCDDNDAVFKFTTSDTIASDNTVSSIMSSQQNVSYQDPAVHVSEARLNAESIEVESKIPYISSGVIANNTNMDKGYYSFPQFNQVERPHLQYVPAATQFLPLHPSSMLPVQTCQVIYQPPRSLQHLVYHPNQPCPVYLVPIGNTPPNSLPINATSQASLNLNASFMNYHVAQDPEVGAMSSFAHGSLTSQNYLIDNATTSFIYVPCNGSQQPEMDFYQQSQNIPVTSRESPNPKYGNELDDDFTHAQIYKSQPPPPTMSSKYQTMTKETTNLISEALAQLHVDNLKQQTETSQPQ. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00214 480 CDD PB1_UP2 13 111 - -
Seca9g00214 480 SUPERFAMILY CAD & PB1 domains 27 112 - -
Seca9g00214 480 PANTHER OS05G0427100 PROTEIN-RELATED 5 343 - -
Seca9g00214 480 Gene3D - 29 112 - -
Seca9g00214 480 SMART PB1_new 24 113 IPR000270 GO:0005515
Seca9g00214 480 Pfam PB1 domain 25 112 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00214 Seca-Chr9 4704030 4706892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00214 10 145 MAP Kinase Kinase Kinase AT1G04700 39.130 8.53e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00214 - - aip:107644557 456.062