Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00199 ATGCATTATTTTGTTCAAGACAATATGTCATCAACAATGAGTTGTCCTTCCCTCAACATTTATATTGAAGAGATTCAAAATCCTCAGCCCCATATTGCTTCCAACCTTAACTCCACAAGTCCTGGATCACCCACACCTTTGGTGCCGAATTGTGATGAAGAATTGAAGCCCAAGGTTGGACAACTATTTAATACATTAGAAGAAGGTGAAAATTTTTATAAAAGGTATGCGCATAATGTTGGATTTAGTGTGCGTTGCTCTTCGGAAACTAAAGATAAAAATGGTGTGAAGCGTTGGAAGTATTTTGTTTGCTCAAAACAAGGTTACAAGCCATATAAGACAAAAGTTGTGGAACAAAGCGAAAGTCTAGGAGAAGGAGTCTTACAAGAGAAGGATGTTATGCAAAGGATGAAGCAAGAAATTAATCCATCATTCTATTATGCATATGAAGCAAATGGAGAAGGTGTTTCCTTAAATGCCAATAAAGAGTTCAATAGTGATTTCAAGTCATGTGTTTGGAGTTCAGAGTCACCAGATGATTTTGAAGGAACATGGAAAACTATAATAATTAGCTTGGTTGAATTTTGGATGAGATTTGATTATGCCATAGAAGCACAGAGGCAAAAGGAGTTGCTTGCTGATAATGATTCACTTCATTCTATGCCAAAATTGAAGTTGGATCGCGGTTTAGAAAAGCATGAAAGAAATGTAAATGAATCAAAGGTGGCAAGGATAAGATCGTTGAACAACAACAAAAAAGGACAAGGCTTTGTAAAGCATGTGGACAACATGCATATCATGATGGTCGTTCAGCTCATAACTGATATGGTGGAGATCACTTGCCTAATGTCTCCTTAG 858 0.3683 MHYFVQDNMSSTMSCPSLNIYIEEIQNPQPHIASNLNSTSPGSPTPLVPNCDEELKPKVGQLFNTLEEGENFYKRYAHNVGFSVRCSSETKDKNGVKRWKYFVCSKQGYKPYKTKVVEQSESLGEGVLQEKDVMQRMKQEINPSFYYAYEANGEGVSLNANKEFNSDFKSCVWSSESPDDFEGTWKTIIISLVEFWMRFDYAIEAQRQKELLADNDSLHSMPKLKLDRGLEKHERNVNESKVARIRSLNNNKKGQGFVKHVDNMHIMMVVQLITDMVEITCLMSP. 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00199 285 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 50 116 - -
Seca9g00199 285 Pfam FAR1 DNA-binding domain 71 119 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00199 Seca-Chr9 4405568 4407614 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g00199 FAR1 2.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00199 - - lja:Lj0g3v0232569.1 174.866