Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00190 ATGGTAGTTCAGCTGTGGATTGCAGAAGGCTTAGTATATCAGTCCAAAAGTCAGAAAAAATTGGAAGAAGTTGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCACTCATACTTCGACTGACTGAAAACTTTGTAATGCATGACCTCATCAATGATTTAGCTACAATGGTTTCATCTGCATATTGTATTAGGTTTGATGAACACAAGTTGCATGAAAGTCTTGAAAGAGTATGTCATTTGTCATATAATAGAGGGAGATATATAAATTTGATAAAGATTAAAAAGTTGCCTTCTGTAACATGCAAGCTTTACAATCTGCAGACCTTATTGTTGACCGGTTGTGAATATCTCACTGAGTTTCCTAAGGACATGGGAAAACTGGTGAACCCACGCCACCTTGACATTAGTGGCACTGCATTGAAGGAGATGCCCGTACAAATAGCTAGGTTACAAAATCTTCAAACCTTTTCCTATTTTATTGTCGGCAACTAG 495 0.3737 MVVQLWIAEGLVYQSKSQKKLEEVGEEYFDELVSRSLILRLTENFVMHDLINDLATMVSSAYCIRFDEHKLHESLERVCHLSYNRGRYINLIKIKKLPSVTCKLYNLQTLLLTGCEYLTEFPKDMGKLVNPRHLDISGTALKEMPVQIARLQNLQTFSYFIVGN. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00190 164 PANTHER DISEASE RESISTANCE PROTEIN RP 2 157 IPR044974 GO:0006952
Seca9g00190 164 Gene3D Ribonuclease Inhibitor 36 163 IPR032675 -
Seca9g00190 164 SUPERFAMILY L domain-like 46 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00190 Seca-Chr9 4302628 4303388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00190 94 154 WRKY Transcription Factor Family AT4G12020 40.984 5.33e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00190 - - aprc:113855655 149.058