Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00181 ATGCAGGTAAGGGTCTTGTGTGATAAGGCAAAGGAGATTTTGATGGAAGAGAGCAATGTCCAGCCTGTGAAAAGTCCTGTTACAATTTGTGGTGATATTCACGGGCAATTCCATGAACTTGCAGAGCTTTTTCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTGTTTATGGGAGAATATGTTGATCGTGGCTATTATTCTGCCGAAACTGTAACGGTAAATATGAACTACCATGCTTTACTTTTTTCTTTTGGTATTTCAAACTGTAACATTTTATCTTGTAATAATTTTTCACAAGTATTTATCGAATTATTTGATTATGGTATTCTAGTGAAATCTCACTGGTCTTCTTAG 357 0.3585 MQVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHELAELFRIGGKCPDTNYLFMGEYVDRGYYSAETVTVNMNYHALLFSFGISNCNILSCNNFSQVFIELFDYGILVKSHWSS. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00181 118 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Seca9g00181 118 PRINTS Serine/threonine phosphatase family signature 26 53 IPR006186 GO:0016787
Seca9g00181 118 Pfam Calcineurin-like phosphoesterase 26 75 IPR004843 GO:0016787
Seca9g00181 118 SUPERFAMILY Metallo-dependent phosphatases 2 74 IPR029052 -
Seca9g00181 118 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 76 IPR047129 GO:0004722
Seca9g00181 118 Gene3D - 1 89 IPR029052 -
Seca9g00181 118 SMART pp2a_7 1 118 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00181 Seca-Chr9 4173510 4174976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00181 10 82 Calmodulin-binding Proteins AT5G63870 37.975 8.37e-09 50.1