Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00153 ATGTCGAGGTTGAATAATTCAGAGAAGAAGCTTGGTGCAGGACGTGTGGTGGCTGTGGCAATTGAGAATAACAAGTCAAGCCAACATGCTGCCAAGTGGGCAGTGGAAAATCTTCTTCCCAAAGATCAATCCCTCTTTCTAATCCATATTAAACAAAGAGCACCTTCCAATCCCACACCATCAACATCGGGAAACCAAGTAGCCAATGAAGTGCAGGAAGATGCGTTTGACAATGAATCCAAGGAACTATTTGATTCATTTCGTGTATTTTGCAACAGAAAAAGTATACCATGCAAAGAAGTATTGTTGGAGGACACAGATATATCCAAGGCATTAATAGAAAGCATAAGCTCATATTCCATTGAGCTTTTGGTACTTGGGGCACCATCAAGGGGTGGCCTTGTTAGAAGATTTAGAACAACGGATGTTCCAAGCACGGTATCAAAAGGGGCACCATCATACTGCACTGTATACATAATTTCTAAAGGAAAAATTTCAAGTGTGAAATCTGCTACATCTCCACTTCCTAAATCTTCACCACCACGTAACCAATTGCAACAACAGCCACAGCCACAGCCACAGCCAGCACGCCGAAGTGTTGATAAGATAGACCCACAATCCACACGTAACTACCCACCAAGACCTTCTGCATCAGAGAAGCCACCATATTTGTCACGCCAGCTACTAGATGAAGATGACATCATATCACCATTCACAAGAATGAACAGATCATATGAGTCCTCAGTTCCAGATTCTGATATATCATTTGTGAGCAGTGGAAGGCCAAGTGTTGATAGAATGTTCCCATCATTATATGATGATCTAGACAATGGAACAGCCCCTAGGCTTTCATGTGGCTCAGACTTTGATGCCAGAAGCTATGGTTCATCCTTCTCAGGACCTAAGTCAATTGACATGGGTGGTTCTGTGGATGGTTTCTCATTCAGCTCACAAGGCAGTGAGATCTCATCATTAAGGTTATCTGACCACAGGGATGATGTGGAAGCAGAAATGAGGAGACTGAAGCTGGAATTGAAGCAAACAATGGAAATGTACAGTTCAGCTTGCAAGGAAGCTTTGACAGCAAAACAGAAGGCAATGGAACTTCAACGTTGGAAGTTGGAAGAACAAAAGAAGTTGGAAGAAGCACAAATGGTTGAAGAAGCAGCATTGTCACTTTTAGAGAAGGAACAAGAAAAGTCTAAAGCTGCCTTAAAGGCAGCAGAAGCATCTCAGAGAATTGCAATTGCAACATTGGAAGCACAAAAGAGAATGAATTCAGAGATGAAAAGTGAATCAGAAGGAAGTCATAGGATGAGGTCAGAAGATTCTTATGTACATTGTCCTGCCAGATATAGAAGATACACTATTGAGGAAATTGAAGAGGCAACACAAGGCTTCTCAGATGCTCTCAAAATTGGTGAAGGAGGTTATGGTCCTGTATATAGGAGTGAACTAGATCACACACAGGTTGCAATAAAAGTTTTGAAGTCAGATGCAGCTCAAGGAAGAGCACAGTTTCAGCAAGAAGTTGAAGTGTTGAGTTGCATAAGGCATCCAAACATGGTTCTTCTCCTTGGAGCATGTCCAGAATATGGTTGCCTAGTATATGAGTACATGGGTAATGGAAGTTTGGATGATTGCCTCTTTAGGAGAGGTAAGGCACCACCTCTTCCATGGCAATTAAGATTCCAAATTGCTGCAGAGATAGCCACAGGTCTCCTTTTCCTTCACCAGACAAAACCAGAACCACTTGTGCACCGTGACTTAAAACCAGGCAATATTTTGCTTGACCGTAACTATGTAAGCAAGATTGGTGATGTGGGGTTGGCAAGGCTTGTTCCTCCTACAGTTGCAGACACTGTGACTCAATACCGCATGACATCAACTGCTGGAACTTTCTGTTATATTGACCCTGAGTACCAACAAACAGGCATGCTTGGGATCAAATCTGATATATACTCACTAGGGATCATGCTTCTACAAATGGTAACAGCCAAGCCTCCAATGGGTTTGACTCATCATGTTGGAAGATCTATTGAGAAGGGGACTTTTGCTGACATGCTTGATCCAGCTATTGAAGACTGGCCAATGGAGCAAACTATGCATTTTGCTAAACTTGCCTTGCAATGTGCTGAAATGAGGAGGAAAGATAGACCTGATCTTGGAAAAATTGTATTACCTGAGCTCAATAAACTGAGAACATTTGCTGAAGAAAACATGCCTATGATGATGTTTAGAGGTGGTGCAGGATTCAATCCTAGATGTAGCACATCTCCTATACATTCCACAACTTCCACAATGCAAGACATTGCAAGTGAATCCCAGTCCCTATCTGGCATCTCTGGATATGAAAGCCGCTCAAGCACATCATCAGTGGGGAGAATATAA 2391 0.4237 MSRLNNSEKKLGAGRVVAVAIENNKSSQHAAKWAVENLLPKDQSLFLIHIKQRAPSNPTPSTSGNQVANEVQEDAFDNESKELFDSFRVFCNRKSIPCKEVLLEDTDISKALIESISSYSIELLVLGAPSRGGLVRRFRTTDVPSTVSKGAPSYCTVYIISKGKISSVKSATSPLPKSSPPRNQLQQQPQPQPQPARRSVDKIDPQSTRNYPPRPSASEKPPYLSRQLLDEDDIISPFTRMNRSYESSVPDSDISFVSSGRPSVDRMFPSLYDDLDNGTAPRLSCGSDFDARSYGSSFSGPKSIDMGGSVDGFSFSSQGSEISSLRLSDHRDDVEAEMRRLKLELKQTMEMYSSACKEALTAKQKAMELQRWKLEEQKKLEEAQMVEEAALSLLEKEQEKSKAALKAAEASQRIAIATLEAQKRMNSEMKSESEGSHRMRSEDSYVHCPARYRRYTIEEIEEATQGFSDALKIGEGGYGPVYRSELDHTQVAIKVLKSDAAQGRAQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMGNGSLDDCLFRRGKAPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKIGDVGLARLVPPTVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQMVTAKPPMGLTHHVGRSIEKGTFADMLDPAIEDWPMEQTMHFAKLALQCAEMRRKDRPDLGKIVLPELNKLRTFAEENMPMMMFRGGAGFNPRCSTSPIHSTTSTMQDIASESQSLSGISGYESRSSTSSVGRI. 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00153 796 Gene3D Phosphorylase Kinase; domain 1 435 539 - -
Seca9g00153 796 MobiDBLite consensus disorder prediction 169 230 - -
Seca9g00153 796 Coils Coil 380 413 - -
Seca9g00153 796 Pfam Protein kinase domain 470 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00153 796 MobiDBLite consensus disorder prediction 169 195 - -
Seca9g00153 796 PANTHER OS02G0152300 PROTEIN 16 747 - -
Seca9g00153 796 SUPERFAMILY Protein kinase-like (PK-like) 444 726 IPR011009 -
Seca9g00153 796 Pfam Universal stress protein family 15 152 IPR006016 -
Seca9g00153 796 ProSiteProfiles Protein kinase domain profile. 467 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00153 796 SMART serkin_6 467 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00153 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Seca9g00153 796 CDD STK_N 16 163 - -
Seca9g00153 796 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 440 539 - -
Seca9g00153 796 Coils Coil 357 377 - -
Seca9g00153 796 MobiDBLite consensus disorder prediction 761 796 - -
Seca9g00153 796 FunFam U-box domain-containing protein 51 540 740 - -
Seca9g00153 796 Gene3D Transferase(Phosphotransferase) domain 1 540 744 - -
Seca9g00153 796 Coils Coil 331 351 - -
Seca9g00153 796 Gene3D HUPs 15 160 IPR014729 -
Seca9g00153 796 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00153 Seca-Chr9 3721990 3726903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00153 1 777 Receptor kinase-like Gene Family AT1G78940 53.662 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Seca9g00153 Pkinase 1.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00153 - - gmx:100803837 1076.62