Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00147 ATGACAATGGGACAATTTGTATGTAACAAGGAGGGAGAGAGAAGTGAGAAGCATCTTAATATGAATGGTAGAAAGAGGGAGGCAAAGGCCATTACACGAACAAAATATAATGCAAGGCTCCGAATTCATTTAAATTATAAGAGTAGGAAGTGGAGGGTGGGTTGTTTTGAACCAATTCACAACCATGAATTGACTCCTGCGAGTATGGTACATTTGCTACCAGCTTATCGTGGGTTGAGTGTTGCTGATAAGGCACAAGTTGATGGTCTTCATTTATATGGTGTTAGGACTTGCCATATTATGGGTCTTATAATGGGTCAGAAGGGGGGTTATTCAGATCTTGGATTTTGTAAGAAAGATTTGTACAATCACATTGATAAGGTCAACAGGGCAAAAACTGAGGATGGTGATGCTTTTGCAGCCTTGTCTTACCTTCAGGCAAAGTATGATAACAATCCAATGACTTTTGTGAAGTTTACAACCATTGAAGATGATAGACTTGAGAACTTGTTTTGGGCTGATGTTGGTAATAGAATTGATTATATTTGTTTTGGGGATGTAGTTGCTTTTGACACCACATACAAGAAAAATAAGTATAACAGACCTTTAGTAATTTTTTGTGGTTATAACCATCATGGTGAAACCACTATTTTTGGTTGTGCTCTTGTTGCTGATGAGAAGACTGAAACATATAAATGGGTCCTTGAAACATTTTTTGAAGCTATGTGTGATAAAGTTCCTAAGGTTGTGGTTACAAATGGAGATGGTGCAATGCGTGAAGCTATTAGGGTTGTTTTTCCTGGTGCTCTTCACAGGCTTTGTGCATGGCACCTCCATCAAAATGCTTGTGAAAATGTTAAGAATCCAAAATTTCTTGAAGATTTCAAGAACCTAATTTATGGAAGTTTTACCCGTGAAAATTTTGAGGATGAGTGGAACAAAGTTGTTGAGAAACATGGTGTGAGGGAAAATAGGTGGGTTAGAAAAGTTTATGAGCTGAAGAGGATGTGGGCCACTGCATATTTAAGGGATAATTTTTTTGGGGGAATTAGGACAACTTCAATCTGTGAGGGAATAAACTCTTTCATTAAAAGGTAA 1098 0.3752 MTMGQFVCNKEGERSEKHLNMNGRKREAKAITRTKYNARLRIHLNYKSRKWRVGCFEPIHNHELTPASMVHLLPAYRGLSVADKAQVDGLHLYGVRTCHIMGLIMGQKGGYSDLGFCKKDLYNHIDKVNRAKTEDGDAFAALSYLQAKYDNNPMTFVKFTTIEDDRLENLFWADVGNRIDYICFGDVVAFDTTYKKNKYNRPLVIFCGYNHHGETTIFGCALVADEKTETYKWVLETFFEAMCDKVPKVVVTNGDGAMREAIRVVFPGALHRLCAWHLHQNACENVKNPKFLEDFKNLIYGSFTRENFEDEWNKVVEKHGVRENRWVRKVYELKRMWATAYLRDNFFGGIRTTSICEGINSFIKR. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00147 365 Pfam FAR1 DNA-binding domain 3 65 IPR004330 -
Seca9g00147 365 Pfam MULE transposase domain 187 281 IPR018289 -
Seca9g00147 365 PANTHER OS01G0519700 PROTEIN 5 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00147 Seca-Chr9 3264607 3265704 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g00147 MULE 2.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00147 - - ccaj:109792835 482.641