Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00119 ATGGGCAGAAAGTGCTCACATTGTGGAAACATAGGGCATAATTCAAGGACCTGCACCAGTTTCAGATCAGGGAGTTTTGTTGGAGTTCGTCTCTTTGGTGTTCAACTAGACATATCTTCCTCTTGTTTCACCATCAAGAAGAGCTTTAGCATGGATTCCTTCCCTTCTTCTTCATCTTCTCCTTCTTCCTCCTCTTTTTCTTCCTCAAGGATTGCCATGGATGACAATTCTGCAGACAGGAACTCTATTGGTTATCTATCAGATGGTCTCATAGTTCGACCACAAGACAGGAAGAAAGGAGTTCCATGGACAGAAGAAGAGCACCGAACATTCCTAATAGGACTTGAGAAGCTGGGAAAAGGAGATTGGAGGGGTATCTCTAGAAACTATGTCACTACAAGAACCCCAACACAAGTTGCTAGCCATGCTCAGAAGTACTTTATTAGACTTGCATCCATTAATAAGATAAAGAAGAGACGTTCAAGTCTCTTTGACTTGGTTGTTGGTCATAATAATGGCAGCACAAACAACACAGCCTCCCCACTAGTTTCAACTCATCAACTACAGGTTGTTAAATCTTCCAAATGTGATGATCAAGTTGAGAAAGATGCCACCTTGTCACTTCTTGGATGCCTAACCTCATTTCAACAACAAGAAAATACCAAATCAAATGAGCAGAAAATCACTACTACTCCTGATACTAATTATCATAACTCTCAAGCTCAATATTCTTCAGCTGCAGAACATCAATCTGTGCCAATCTGGCCTCATCCTCAGAACAAATCTTCAAATGTGACACCAAATGCATCAGTAGTGCCTGATCTGGAGCTCACACTTGCAGTCCCCAAGGCTAAGAGTACCCTGCAACAAGAACAAGCTAAATCATCCCCTGGTTCCTTCCTTCTTGGGCCAATTAGTGTCACCTAA 927 0.4207 MGRKCSHCGNIGHNSRTCTSFRSGSFVGVRLFGVQLDISSSCFTIKKSFSMDSFPSSSSSPSSSSFSSSRIAMDDNSADRNSIGYLSDGLIVRPQDRKKGVPWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRLASINKIKKRRSSLFDLVVGHNNGSTNNTASPLVSTHQLQVVKSSKCDDQVEKDATLSLLGCLTSFQQQENTKSNEQKITTTPDTNYHNSQAQYSSAAEHQSVPIWPHPQNKSSNVTPNASVVPDLELTLAVPKAKSTLQQEQAKSSPGSFLLGPISVT. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00119 308 SMART sant 99 149 IPR001005 -
Seca9g00119 308 PANTHER TRANSCRIPTION FACTOR KUA1 3 271 - -
Seca9g00119 308 MobiDBLite consensus disorder prediction 51 71 - -
Seca9g00119 308 CDD SANT 102 147 IPR001005 -
Seca9g00119 308 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Seca9g00119 308 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Seca9g00119 308 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Seca9g00119 308 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Seca9g00119 308 SUPERFAMILY Homeodomain-like 97 152 IPR009057 -
Seca9g00119 308 FunFam transcription factor MYB1R1 101 152 - -
Seca9g00119 308 MobiDBLite consensus disorder prediction 284 308 - -
Seca9g00119 308 Gene3D - 101 153 - -
Seca9g00119 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Seca9g00119 308 MobiDBLite consensus disorder prediction 219 267 - -
Seca9g00119 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 149 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00119 Seca-Chr9 2782566 2784113 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca9g00119 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00119 - - adu:107490116 308.145