Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00107 ATGGGTCGGCGAAAGAACAAGAATCAGAGCAACGAGGACGCTAACAACACGAACATGAGCCACCTTCGATTCCAGGATGCTGACGAGGTCATCGAGGATGTCGCTGAGACCTCCAACCTCGACCAATCCATGTGTTTCGACCATGACGATTCCGATGACAAAACCAGCGCCGATTACTACTTCGACTCCTACTCTCATTTTGGTAACTTCCCTTCCAATAGTTCACATGCTTTAGTTTTGAGCTTTTTCAGCTGGGAAATGTTGAAGGACACAGTAAGAACTAAGACATATCAAAATGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAATAGTTCTTGATGTGGGTGCTGGGACTGGGATTTTATCACTATTCTGTGCCAAAGCGGGGGCAGAACATGTCTATGCGGTTGAGTGCTCCCATATGGCTGACATGGCCAAGGAGATAGTTGAAACTAATGGTTACTCTAATGTTGTAACGGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTCCTAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGATAAATGGCTTGCTGGTGATGGAATTGTGCTACCAGATAAAGCATCCCTCTACCTCACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATTAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGATCAGAATCAGATTGCTACAAACTGTCAACTACTCAAGACAATGGACATCTCAAAGATGACTCCTGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTTGCTGAACGTGACGATTATATTCATGCTCTTGTTGCATATTTTGATGTATCATTTACGAAGTGTCATAAATTGATGGGCTTCTCTACAGGGCCGAGGTCACGAGCTACACATTGGAAACAAACTGTCCTATATCTGGAAGATATCTTGACAATTTGTGAGGGGGAGACGGTAGTAGGGAGCATGACTGTGGCTCCAAACAAAAAAAATCCTCGAGATGTTGATATAATGCTCAAGTATTCATTGAATGGCAAGCGATGCAATGCTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1179 0.4114 MGRRKNKNQSNEDANNTNMSHLRFQDADEVIEDVAETSNLDQSMCFDHDDSDDKTSADYYFDSYSHFGNFPSNSSHALVLSFFSWEMLKDTVRTKTYQNVIYQNRFLFKNKIVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGYSNVVTVLKGKIEEIELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLAGDGIVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMTPGDCSFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDILTICEGETVVGSMTVAPNKKNPRDVDIMLKYSLNGKRCNASRVQYYKMR. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00107 392 FunFam probable protein arginine N-methyltransferase 1 48 214 - -
Seca9g00107 392 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 391 IPR029063 -
Seca9g00107 392 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 19 379 IPR025799 GO:0016274|GO:0018216
Seca9g00107 392 MobiDBLite consensus disorder prediction 1 21 - -
Seca9g00107 392 Pfam Ribosomal protein L11 methyltransferase (PrmA) 107 183 - -
Seca9g00107 392 CDD AdoMet_MTases 113 213 - -
Seca9g00107 392 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 57 372 IPR025799 GO:0016274|GO:0018216
Seca9g00107 392 FunFam Blast:Protein arginine N-methyltransferase 1 216 392 - -
Seca9g00107 392 Gene3D - 216 392 - -
Seca9g00107 392 Gene3D Vaccinia Virus protein VP39 48 214 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00107 Seca-Chr9 2623366 2626302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00107 60 355 C2H2 Transcription Factor Family AT3G12270 37.107 9.33e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00107 K11434 - gmx:100781777 660.988