Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00098 ATGGAAAACATTAAAGATCCATCAATTTACAAAAATCCCGTCATTCTGCAGAGTGAGGACTTAATGAAGTATATATTGGAGACTGCTGTTTACCCTAGAGAACCAGAGCCTCTCAAAGAACTGAGAGATGCCACTGAGAATCACCCTTGGGGTTTCATAGCTACTTTACCTGATGCGGGTCAGCTACTCACCATACTTTTGAAGCTGTTGAATCCCAAAAAGACAATTGAAGTGGGAGTGTTTACTGGGTACTCACTTCTCCTAACTGCACTTAACATCCCTGATGATGGAAAGATTACAGCCATAGATATTGACAGGAAAGCTTATGAGGTTGGATTACCAGTCATCAAAAAAGCTGGAGTAGAACACAAGATTAACTTCATAGAGTCTCCAGCTCTACCAATTTTGGATAAATTGCTAGAAGATCCTGCAAATGAAGGAACTTTTGACTTTGCCTACATTGATGCTGACAAAGAGAACTATGTGAACTACCATGAGAGGCTTATAAAACTGGTCAAGGTTGGTGGGTTACTTATATATGACAACACACTGTGGGGTGGACGTGTTGCTTGGCCTGAAGACAAAGTTCCACCACACAGCAAACCAGGGAGGGATGCAGCAATTGAATTCAACAAAACAATCACAAAAGATTCTCGTGTTGAATTTTCTCTTACTTCTATAGGGGATGGGCTCAGTATTTGCAGGCGCATTGCCTGA 717 0.4142 MENIKDPSIYKNPVILQSEDLMKYILETAVYPREPEPLKELRDATENHPWGFIATLPDAGQLLTILLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAGVEHKINFIESPALPILDKLLEDPANEGTFDFAYIDADKENYVNYHERLIKLVKVGGLLIYDNTLWGGRVAWPEDKVPPHSKPGRDAAIEFNKTITKDSRVEFSLTSIGDGLSICRRIA. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00098 238 PANTHER O-METHYLTRANSFERASE-RELATED 12 237 - -
Seca9g00098 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Seca9g00098 238 CDD AdoMet_MTases 76 180 - -
Seca9g00098 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Seca9g00098 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Seca9g00098 238 Gene3D Vaccinia Virus protein VP39 7 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00098 Seca-Chr9 2390101 2392212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00098 15 237 Monolignol Biosynthesis Gene Families AT4G26220 63.229 1.43e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00098 K00588 - gmx:100800911 442.195