Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00087 ATGGCAAGTTCAATTGGATTCATGCTGTTGTTGATGCTTTGTGTTGGTCTTACAGTTTCAGTTCATGCACAGCGACAAACAGGCTTCATAAGTATTGATTGTGGTGGTCCAGAGAATTTTGAGTATACAGATGATACCACTGAAATAAAGTACAGCACAGATGGAGCATACATACAAACAGGGGTTAACAAGAACATTTCCTCTGAGTATGCATACCCAAAGAATCTCAATCTTCCATTACCTCTGTCTGATCTCAGAAGTTTTCCTCAGGGAATGAGGAACTGTTACAGGTTACTAGCTGGAAGAAAAGGCAGTTTACATTTAATAAGGGCTTCATTCTTATATGGAAACTATGATGGAGAAAACAAACTACCAGAATTTGATCTCTATGTTGGTGTCAATTTCTGGTCATCAGTGAAATTTAGAAATGCTTCAGAGGAAGTTACAATGGAAATAATCAGCAGGGCACAATCAGAGGTGACAAATGTTTGTCTTGTGAACAAGGGAGCAGGAACTCCTTTTATCTCAGCATTGGAACTTAGACCACTTAATAGTTCTATTTATAATACTGAGTTCGGGGAATCTGCTTCACTGTTACTTTTTAAACGATGGGACATTGCAGCACTCAATTTATCTGGGAGATATGAAGATGATATTTATGATAGAATTTGGTCTCCATACAATTCCTCTTCTTGGGATTCTGTGAGCACTTCCTCAACAATAAACATTGATGGTGATGGCTATAAAGCACCAATTGAAGTCATCAGCAGTGCTGCTAGACCAAGGAATAACAGTGGTACTTTGGAATTTTCCTGGACCCCAGATGATCCAAATTGGAAATTTTATGTCTACATGTACTTTGCTGAAGTGGAGCGGCTTCAGAAAACCCAACTGAGGAAATTCAATATATCCTGGAATGGATCTCCATTGATTGAATCATTTGTACCACGCTACTTGTATGCAACCACTCTTTCTAACTCAAAATCCTTGGTTGCAAATGAACATCGAATTTCTATACACAAAACAAAAGATTCAACTCTTCCACCCATTCTCAATGCAGTTGAGATTTTTGTAGTAAGACAGCTGGATGCACTTTCAACATTTGGGCATGATGTTGATGCCATGATGGAAATAAAAGATAGTTACAAAGTTGAAAGAAATTGGGTGGGTGATCCATGTGAGCCAAAGAACTACACTTGGGAGGGCTTAAAATGCAACTACAGCACTTCACTTCCTCCCCGAATCATATCACTGAATCTAAGCTCAAGCAGTTTGAGTGGAATAATAACTCCTGCCATTTCCAATCTATCTTCGTTGGAATCTTTGGATTTAAGTGACAATAGCTTAACTGGACCAGTGCCTCAGTTTTTGGAAGCATTGATATCCCTTAAATATTTGAATTTACAGGGAAACCAACTTTCAGGTTATGTCTCAGACACTCTTCTAGAAAGATCAAATGCTGGATTACTTACACTGAGGGTGGATGACCAAAATCTGTGTGACTCAGATACAAGTAACAAAACGAAAATTGTTGTTCCCATAGTCGTACCAGTATCATCAGTTTTAGTTATTTTGGTTATTTTTGTTCTCTTTTGGAAGCTTAGAAGAAATGAGAAATCAGACGAAGAGATGAGTAGTAAGATGACCAGAGTAAGAACTGTATCATCAAAGAACTGGCAATACACGTATGCTGAAGTGTTGGACATCACCAGCAACTTTGAAATGGTCATTGGGAAGGGAGGATTTGGAACTGTGTATCGCGGTCACATGAATGATGGCAATGAAGTTGCAGTGAAGATGCTTTCTCCATCATCAGCTCAGGGGCCAAAGGAATTTCAGACTGAGGCTGAGCTCTTGATGACAGTTCATCACAAAAATTTGGTATCCTTCATTGGTTATTGTGATGAAGATAACAAGATGGCACTCATATATGAGTACATGGCCAATGGAAACCTGAAAAATTACCTCTCAGGTAGACCCTTACACACACTGGCACTGCTCCACACTGTATCTTATTTATTTACTACACATAATATCATGGTTGCAGATAAAAAGTCACATTGTTTGAGTTGGGAAAGGAGAATTCAGATAGCAATTGATGCCGCAGAAGGATTGGATTACCTACACCATGGATGCAAGCCACCTATAATACATAGGGATGTGAAGTCAGCTAACATTCTTTTGAGCCAAGACTTAGAAGCTAAGATAGCAGATTTTGGCCTCTCCAAGGCGTTTAAGAATGACAACCAAAATGCAGAATCTGCAGTGATTCATGATGATGATAAAAAGCCAAGATCTACATTCATGGGCACAACAGGGTACCTTGACCCAGAGTACTACAAATTACGGAACTTGAATGAGAAAAGTGACATCTACAGCTTTGGAATTGTTCTATTGGAATTAATCACTGGTCGTCCTGCAGTATTAAAAGGCAATCCATCAATCCACATACTTGAGTGGTTAAGACCTGAGCTTGAAAGAGGGGACTTGAATAGAATTTTAGATCCAATGCTTGAAGGCCAATTTGATGGACGTTCTGGGTGGAAAGCTTTAGGAATAGCAATGTCATGCACTGCATCACCCTCCATTCAGAGACCTACAATGAGTGTTGTGTTAGCAGAGCTAAAACAGTGTTTTAAAATGGAGTCGCCTAGTGATAGGGAAATATTTGTGGCCCCAAAACAATTCTACAGCGAATTTTGTAGTTCATCTGAAGCATATTCCATGGATAGTGAATCTATCACCTATCCTTATCCAAGGTAG 2763 0.392 MASSIGFMLLLMLCVGLTVSVHAQRQTGFISIDCGGPENFEYTDDTTEIKYSTDGAYIQTGVNKNISSEYAYPKNLNLPLPLSDLRSFPQGMRNCYRLLAGRKGSLHLIRASFLYGNYDGENKLPEFDLYVGVNFWSSVKFRNASEEVTMEIISRAQSEVTNVCLVNKGAGTPFISALELRPLNSSIYNTEFGESASLLLFKRWDIAALNLSGRYEDDIYDRIWSPYNSSSWDSVSTSSTINIDGDGYKAPIEVISSAARPRNNSGTLEFSWTPDDPNWKFYVYMYFAEVERLQKTQLRKFNISWNGSPLIESFVPRYLYATTLSNSKSLVANEHRISIHKTKDSTLPPILNAVEIFVVRQLDALSTFGHDVDAMMEIKDSYKVERNWVGDPCEPKNYTWEGLKCNYSTSLPPRIISLNLSSSSLSGIITPAISNLSSLESLDLSDNSLTGPVPQFLEALISLKYLNLQGNQLSGYVSDTLLERSNAGLLTLRVDDQNLCDSDTSNKTKIVVPIVVPVSSVLVILVIFVLFWKLRRNEKSDEEMSSKMTRVRTVSSKNWQYTYAEVLDITSNFEMVIGKGGFGTVYRGHMNDGNEVAVKMLSPSSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEDNKMALIYEYMANGNLKNYLSGRPLHTLALLHTVSYLFTTHNIMVADKKSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSQDLEAKIADFGLSKAFKNDNQNAESAVIHDDDKKPRSTFMGTTGYLDPEYYKLRNLNEKSDIYSFGIVLLELITGRPAVLKGNPSIHILEWLRPELERGDLNRILDPMLEGQFDGRSGWKALGIAMSCTASPSIQRPTMSVVLAELKQCFKMESPSDREIFVAPKQFYSEFCSSSEAYSMDSESITYPYPR. 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00087 920 Pfam Malectin-like domain 32 358 IPR024788 -
Seca9g00087 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Seca9g00087 920 Pfam Leucine rich repeat 417 473 IPR001611 GO:0005515
Seca9g00087 920 SUPERFAMILY Protein kinase-like (PK-like) 552 875 IPR011009 -
Seca9g00087 920 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
Seca9g00087 920 FunFam Leucine-rich repeat receptor-like kinase 370 501 - -
Seca9g00087 920 FunFam Os07g0541700 protein 675 758 - -
Seca9g00087 920 SUPERFAMILY L domain-like 397 499 - -
Seca9g00087 920 ProSiteProfiles Protein kinase domain profile. 571 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00087 920 PANTHER OS07G0107800 PROTEIN-RELATED 30 879 - -
Seca9g00087 920 FunFam Leucine-rich repeat receptor-like protein kinase 549 646 - -
Seca9g00087 920 Gene3D Phosphorylase Kinase; domain 1 577 647 - -
Seca9g00087 920 Gene3D Transferase(Phosphotransferase) domain 1 648 893 - -
Seca9g00087 920 SMART serkin_6 571 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00087 920 Gene3D Ribonuclease Inhibitor 370 488 IPR032675 -
Seca9g00087 920 Pfam Protein tyrosine and serine/threonine kinase 573 804 IPR001245 GO:0004672|GO:0006468
Seca9g00087 920 CDD STKc_IRAK 577 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00087 Seca-Chr9 2280910 2286860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00087 8 882 Receptor kinase-like Gene Family AT4G29180 50.785 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca9g00087 Malectin_like 3.2e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00087 - - gmx:100793137 1349.34