Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00060 ATGGAGAAGGGCTGGATTCTGGCCTTTGTCCTCCTCATTCTCCATTTAAGTACAGCAAAAGCTGCTTTTAGTGTTAGCGGTGGTGTTGGTGTAGGTGTTGGCGTTGGAGGTGGTGGCGGTGGCGGCGGCGGCGGCGGTGGAGTGGTTTGGGTTGGGGGAGGGATTAACAGCCCAAAGCCCCCTGGATCATCAGTGCCAAAGCTGAATGCAGCTTACACAGCTCTCCAGGCATGGAAATCTGCAATTACTGATGACCCACTAAAGATTTTAGATAGTTGGGTCGGTCCTAATGTGTGTTCTTACAAAGGAGTCTTCTGTGCAAATCCTCAAGATGAAATGGGTTCATCAGCTGTCCCAGTTGTTGCAGGCATAGATCTCAACCATGCAAATCTTCAAGGAACTCTTGTCAAAGATCTCTCTTTGCTCACTGATATGTCTCTTCTCCACCTCAACAGTAATAGATTCACTGGCACTGTTCCTGATACATTCAGGGACCTCATGTCTTTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCTGGTCCTTTTCCAGCTGTTATTTTCTACATGCCAAGCCTCATCTACTTAGACCTCAGATTCAACTTCTTCTCAGGGCCCCTCCCTCAAGAACTTTTCAATAAGAACCTGGATGCAATATTTGTCAACAACAATCAATTTGAAGGTGAAATTCCCCAAAATTTGGGCAATTCCCCTGCCTCGGTGATAAATTTAGCCAACAACAAATTAAGTGGAAACATCCCAGCAAGTTTTGGTTTCATGGGTTCTAAGATAAAGGAGATTCTGTTCCTCAATAACCAGTTAACTGGCTGCATTCCTGAAGGAGTGGGGCTCTTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAATGCACTTATGGGTCATTTGCCAGACACACTATCTTGCCTGCAAGATATAGAAGTCCTGAATTTGGCACATAATCAGCTTTCTGGGGAGTTATCAGATATAATCTGCTCTCTGAGAAGCCTTGCTAATCTAACCGTTTCCTACAATTTCTTTTCTGGGTTCAGCCAGCAATGTTCAAGGCTTTTCTTTAGGAATGTGGGTTTTGATTTCTCACTTAACTGTATTCCCGGGAGGAACATGCAGAGACCTCAACCTGAGTGCTCTATGATCCCTGGAGGTAGCTTAAGTTGTCTCAGAATCCCTACACCAAAGCCTCTTGTTTGTGGTTCGCTGGCTGTAAGTACCTCTAAGCAAACTGATTCCACTTCACCATCTCCTTGA 1266 0.4518 MEKGWILAFVLLILHLSTAKAAFSVSGGVGVGVGVGGGGGGGGGGGGVVWVGGGINSPKPPGSSVPKLNAAYTALQAWKSAITDDPLKILDSWVGPNVCSYKGVFCANPQDEMGSSAVPVVAGIDLNHANLQGTLVKDLSLLTDMSLLHLNSNRFTGTVPDTFRDLMSLEELDLSNNQLSGPFPAVIFYMPSLIYLDLRFNFFSGPLPQELFNKNLDAIFVNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNALMGHLPDTLSCLQDIEVLNLAHNQLSGELSDIICSLRSLANLTVSYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRNMQRPQPECSMIPGGSLSCLRIPTPKPLVCGSLAVSTSKQTDSTSPSP. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00060 421 Gene3D Ribonuclease Inhibitor 69 236 IPR032675 -
Seca9g00060 421 Pfam Leucine rich repeat 147 201 IPR001611 GO:0005515
Seca9g00060 421 PRINTS Leucine-rich repeat signature 309 322 - -
Seca9g00060 421 PRINTS Leucine-rich repeat signature 169 182 - -
Seca9g00060 421 Pfam Leucine rich repeat N-terminal domain 69 106 IPR013210 -
Seca9g00060 421 SUPERFAMILY L domain-like 72 355 - -
Seca9g00060 421 FunFam Leucine-rich repeat extensin-like protein 1 72 236 - -
Seca9g00060 421 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 58 409 - -
Seca9g00060 421 Gene3D Ribonuclease Inhibitor 237 360 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00060 Seca-Chr9 1722161 1723426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00060 66 394 Leucine-rich Repeat extension Gene Families AT3G24480 50.149 7.90e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00060 - - gmx:100775544 699.508