Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00027 ATGGAAAGTAATGTCATGGACGGTTCACAGGAGAACAATGGAATGGAGGTTCCAGATGGAAATTCATTTGATCATGGTGGGAGTTTTGTCTGTGATCAGGAAGAGGAGGCCGACCAATATAGGATTGACAATGTTGCAAATTTGAAGAGGGTTAATTTTATTGGTTTAACAAATGATGAGGTAATGCTCTACCACTTTTTGAATCGTAATGTAGCATTTGAGTTCTACAATACGTATGCTCTAAAATGGGGATTTGCGGCTCGTAGATGGAATATTCTAAAAAATAAGAGAGGAGAGATTACTCAACAAGCTTTTGTGTGGTTCAAGGAGGGATTTCGTGACAAGAAACACTTAGAGAGGGAGGATAGAAAGCGTGAGCCTAGAGCAATGACAAGGTGTGGTTGTTTTGCCTTTTGTTGTGTGCGTTTAAATAAAGAGAATCGTCGATGGAAGGTGAAAGGTTTCAATGATGTCCATAATCATGAGTTGTTGGCTGAGGAGTATGTTGGAATGTTGTCTACACATAGAAAGATGAATGAAGGGGGGATTTACAAGAGATTTGGAATGAGAGAAAATAGCATCAGAAAGGAGGTTGTTGCAGATTCAGAATTCAAATAA 618 0.39 MESNVMDGSQENNGMEVPDGNSFDHGGSFVCDQEEEADQYRIDNVANLKRVNFIGLTNDEVMLYHFLNRNVAFEFYNTYALKWGFAARRWNILKNKRGEITQQAFVWFKEGFRDKKHLEREDRKREPRAMTRCGCFAFCCVRLNKENRRWKVKGFNDVHNHELLAEEYVGMLSTHRKMNEGGIYKRFGMRENSIRKEVVADSEFK. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00027 205 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Seca9g00027 205 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 48 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00027 Seca-Chr9 839777 840689 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g00027 FAR1 2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00027 - - mtr:120580664 155.221