Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08270 ATGACAAAGGTGGTCTTTACATGCAGTTTGTTGCGAGTAACTGTTATTGGGGAGAATTTGATCAATGGCCAGAGAACAAGGAGTCACCTATGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTGGGGAAAACTGAAGCTGAAGGAGAAAGGCTGAAGGAATCTCAGTTCATAAATAAGTCTCTATCAACACTTGGTGATGTTATTTCAGCTCTTGCGTCCAAATCAGCCCACTTACCTTTCAGGAACTCGAAGCTCACTCATATACTCCAGAGCTCTTTAGGTGAGGATTCATTTCAGCACTATGCTCCTTTGGGGATGACTCCTCCCAGATTTGATTTACATCTAAATTTTGGTGCTTTATATATGATAATACAATCTAATTGTAATTTTATAACTGTTCTGTTATTTAGAAGGTCTTATTGGTTTGTCCATTCTATCTATTATTTTCTTTATTTATGA 459 0.3834 MTKVVFTCSLLRVTVIGENLINGQRTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSTLGDVISALASKSAHLPFRNSKLTHILQSSLGEDSFQHYAPLGMTPPRFDLHLNFGALYMIIQSNCNFITVLLFRRSYWFVHSIYYFLYL. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08270 152 ProSiteProfiles Kinesin motor domain profile. 1 94 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g08270 152 PANTHER KINESIN-LIKE PROTEIN KLP-3 9 97 IPR027640 GO:0003777|GO:0007018
Seca8g08270 152 Gene3D Kinesin motor domain 4 100 IPR036961 -
Seca8g08270 152 Pfam Kinesin motor domain 10 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g08270 152 SMART kinesin_4 3 106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g08270 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 98 IPR027417 -
Seca8g08270 152 ProSitePatterns Kinesin motor domain signature. 28 39 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca8g08270 152 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g08270 152 PRINTS Kinesin heavy chain signature 29 47 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08270 Seca-Chr8 180464380 180464838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08270 10 94 Calmodulin-binding Proteins AT5G65930 51.765 2.33e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08270 K10406 - gmx:100808603 160.999