Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08262 ATGGACAAAAAGTCGTCGAGCTTCTCATCAAGAAACAGCGGGCAGCAATGGGAAGGAGAAAAGGAAGATCTCCCACAGGTTCTGGAGGAGGTGGATCGTTTTCTCCATAGCACAACTGCTAGTCGTCCTGCAGGGGAAGTTCCAGATTGCGTTCTGGTGTTGGCCAGATTGTTGGATTCTTTGATAGATAAATACAACAGGGGCAAGAGAAGCAAGTTTGGGCAGGAGCCAGAGGATGACAAGTTCCTTCTAGATGCCGTGGATCGCATCTCCAAGCTCTCCGGATCCGCCACTTTGAGTTTGAACGCCTTGGATAAAACTAGCTCCGTCCTAGAAAAAGCAATATCTTTTCTAGAGAATGACCTCTGCGCTCTTCTGCAGGATCCTGAATCCAAAACGCCTAACAAGTCATCCTCCTTTGGTTCCGACTCTGATCTGTGTGCCATTCCTGAGAACGATTCCCCCGGGGGCAGGGCCAGGCCTAACCCAGATGATGAGGGTGAGGAGGATGAGGATAAGGATGGGGACTTGCCAGCTTTCTCTACAGAGAAACTTTCCATTCTGAACAAGATCGCCACCGCTATGATCACCGCGGGCTATCAGACAGAATGTTGCATGGCCTTTGTTAATTTCAGGCGAAACGCATTCAAAATCGCGTTGCAGAATTTCGGATACGCGAGAGTAACAATGGAGGAGGTTTATAGAATGCAATGGGAATCGCTGGAAGGAGAAATTGCCACGTGGAACAAAGTGGTTCGGCATTGCACCACCGTGCTCTTCAACGCGGAACGAAGGCTCTATGATTCCGTGTTCCCCAATCAACCCTCCATATCGCAGAGCCTGTTTAGTGATCTTGCACGGGCTGTCATCATCCATTTTATGAATTTCGCACAAGCGGTGGTTTTAACGAAACCATCGCCGGAGAAACTATTCAAATTTCTGGATATGTACGAGACCCTCAGGGACATGGAGCCTGGCATTCTTAACGATTCGTATCCAGAGCGGTGTGCCAAGGAGCTTGCATACGAGACAGCCATAGCAAAGGATAGGGTAGTAGAGGCTGCTGTGGCCATGTTCTGTGATTTGGAAAACTCCATTAAGAGTGATAATGAACGGATTCCAGTCCCCAATGGTGCAGTTCACCCATTGACTCGCTATGTCATGAATTATCTTAAATATGCGTGCGAGTATAAAGACACATTGGAGCAGGTGTTTCTTACGGTTAAGGATAATAACACCAACACCGCACATGATCATGATCATGATCAATTAGTAGTAGTGGAAGATGGAACGCCTAAGAATTCACCTTTTGCGGTTCAATTGATGACAATCATGGATCTTTTGGATGCAAATGTGGAAAGGAAGTCCAATCTGTATAGGAATCCAGCTTTACGCTATGTTTTTCTAATGAACAATGGGAGATACATGGTGCAGAAGGTCAAAGGAAGCGCGGAGCTTCACGAATCAATGGGTGACAATTGGTGCAGGAAGAGGCAATCGAGTCTGAGGTTGTACCATAAGAGTTATCAGAGAGAGACATGGAGTAAGGTGCTGCAGTGCCTTAACCCGGAGGGTCTGCAGGGGAGTGGGAACAAGGTGTCGAAACAAGTTATCAAAGAGAGGTTCAAGTGCTTCAGTGGCATGTTTGAAGAAATACACAAGACACAGAGTAATTGGATGGTGAGTGATGAGCAACTTCAGTCGGAGCTCAGGGTTTCAATATCGGCGTTGGTGATCCCAGCGTACCGCTCTTTTCATGGAAGATTCAAACACCATATAGAATCAGGTAGACATATTGACAAGTATATCAAGTATCATCCCGAAGACATTGAGACTTTGATTGACGATTTCTTTGCTGGAAACTCCACCTCCATGGCCCGGAGGAGAACTTGA 1893 0.468 MDKKSSSFSSRNSGQQWEGEKEDLPQVLEEVDRFLHSTTASRPAGEVPDCVLVLARLLDSLIDKYNRGKRSKFGQEPEDDKFLLDAVDRISKLSGSATLSLNALDKTSSVLEKAISFLENDLCALLQDPESKTPNKSSSFGSDSDLCAIPENDSPGGRARPNPDDEGEEDEDKDGDLPAFSTEKLSILNKIATAMITAGYQTECCMAFVNFRRNAFKIALQNFGYARVTMEEVYRMQWESLEGEIATWNKVVRHCTTVLFNAERRLYDSVFPNQPSISQSLFSDLARAVIIHFMNFAQAVVLTKPSPEKLFKFLDMYETLRDMEPGILNDSYPERCAKELAYETAIAKDRVVEAAVAMFCDLENSIKSDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEQVFLTVKDNNTNTAHDHDHDQLVVVEDGTPKNSPFAVQLMTIMDLLDANVERKSNLYRNPALRYVFLMNNGRYMVQKVKGSAELHESMGDNWCRKRQSSLRLYHKSYQRETWSKVLQCLNPEGLQGSGNKVSKQVIKERFKCFSGMFEEIHKTQSNWMVSDEQLQSELRVSISALVIPAYRSFHGRFKHHIESGRHIDKYIKYHPEDIETLIDDFFAGNSTSMARRRT. 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08262 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 28 619 IPR004140 GO:0000145|GO:0006887
Seca8g08262 630 MobiDBLite consensus disorder prediction 132 178 - -
Seca8g08262 630 MobiDBLite consensus disorder prediction 1 23 - -
Seca8g08262 630 Pfam Exo70 exocyst complex subunit 247 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca8g08262 630 SUPERFAMILY Cullin repeat-like 79 618 IPR016159 -
Seca8g08262 630 Gene3D Exocyst complex component Exo70 68 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08262 Seca-Chr8 180338599 180340491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08262 24 629 EXO70 exocyst subunit family AT5G13150 50.643 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08262 K07195 - gmx:100784339 810.061